Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00370 ATGGCTGCGACACGCATAGCTTCCTCCTTATTTTCTTCTTCAATCAACACTACTGTCAAAAATTGCTTCGCTTCAAAAACCATAATAGACCCTCCTCTCATAGCAATATCCTCCAATCGCAAGTTATCATCACTGACCCAGTGCTATTATTTTGTGGAACCTTTGTCATTAATTGGTGTTACTAAGTTATGGACGCCTAAAACTTCAGCAGCTGTTGTTGTTTCACAAGAAGAAATTGCTTTGTCTGATGATGCGGGCTTAGTTGAAGAGGAAAAAGAAAGGCAAGTATTGGAAGAACAGCAACAAGATGATTCTACTGAGTCCTCTATCAACACTAAGCTTTACTTTGGAAATTTGCCGTACAGTGTTGACTTAAATCTTTTGTTTGATGTGATGCATTCCAGAAATTCCATAATGTTAATAATCTTATATATATATTTACAGGTTCTCTATGACAGGGACACTGGAAAAAGCAGAGGCTTTGCATTTGTGACAATGAGTTGCATTGAAGATTGCAATGCAGTAATACAAAATCTTGACGGAAAAGAATTCTTGGGCCGAACTTTACGGGTAAACTTCGCTGACAAGCCAAAACCAAAAGAACCATTGTACCCTGAAACTGAGCATAAGCTATTTGTTGGAAATCTGTCATGGTCAGTAACTTCTGAGAGCCTTACAGAAGCGTTTCAAGAATATGGAACTGTGGTTGGAGCTAGGGTCTTGTATGATGGCGAAACAGGAAGGTCACGCGGCTATGGCTTCGTTTGCTATTCGACAAAGGCAGAAATGGAAGCTGCCCTTACATCTCTGAATGATGTGGAACTAGAGGGACGGGCAATGCGTGTAAGTGTGGCGCAAGGTAAGCGTTCGCAAGGTTAA 879 0.4073 MAATRIASSLFSSSINTTVKNCFASKTIIDPPLIAISSNRKLSSLTQCYYFVEPLSLIGVTKLWTPKTSAAVVVSQEEIALSDDAGLVEEEKERQVLEEQQQDDSTESSINTKLYFGNLPYSVDLNLLFDVMHSRNSIMLIILYIYLQVLYDRDTGKSRGFAFVTMSCIEDCNAVIQNLDGKEFLGRTLRVNFADKPKPKEPLYPETEHKLFVGNLSWSVTSESLTEAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTKAEMEAALTSLNDVELEGRAMRVSVAQGKRSQG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00370 292 Coils Coil 87 107 - -
Adu09g00370 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 211 280 IPR000504 GO:0003723
Adu09g00370 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 114 190 IPR000504 GO:0003723
Adu09g00370 292 Gene3D - 80 199 IPR012677 -
Adu09g00370 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 209 287 IPR000504 GO:0003723
Adu09g00370 292 Gene3D - 200 292 IPR012677 -
Adu09g00370 292 SUPERFAMILY RNA-binding domain, RBD 111 289 IPR035979 GO:0003676
Adu09g00370 292 PANTHER 31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC 201 290 - -
Adu09g00370 292 PANTHER 31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC 87 132 - -
Adu09g00370 292 PANTHER 31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC 148 194 - -
Adu09g00370 292 SMART rrm1_1 113 192 IPR000504 GO:0003723
Adu09g00370 292 SMART rrm1_1 210 283 IPR000504 GO:0003723
Adu09g00370 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 112 196 IPR000504 GO:0003723
Adu09g00370 292 PANTHER TRANSFORMER-2-RELATED 87 132 - -
Adu09g00370 292 PANTHER TRANSFORMER-2-RELATED 201 290 - -
Adu09g00370 292 PANTHER TRANSFORMER-2-RELATED 148 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00370 Adu-Chr9 4119475 4121424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00370 112 288 Eukaryotic Initiation Factors Gene Family AT2G36660 29.474 8.07e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00370 - - adu:107464158 558.525