LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu09g00343	ATGGCTGCAAAACTTGAGGGTCGAGCTTATCTCTCTTCTTTTGTTGATGCTGTTTCAAAGAAGCTGTCTTCAATACTTGAAGATGACTTTGTACTCGAAAGAAACGACTCTGAGCTGAAATTGCTTGAAAGGTTGGATGATTGTCTGTGTGATGTTGGACCTGTGCTTGATGATGCTGAGCTGATGCAGTTCAGTGACGAGAGAGTAAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATATGGCTGATGACTTTCTCGATGAACTCTCCACTAAAGCTGCCACTGCTACTCCAAGGGATCCAAGTAACTCTTATGACTGGTCTCGCCCTGTTGATTCAATTATTGAAGATAGTGGTGTCAATGTCATTGAAAAAATAGTTGCCAAACTAGAGTCTAGTGTACGACGAAAAGGTAAACTTTGTCTGAGAGAGAGTGCCAAGGTGGACTTCTCATCATGGAGAATTCCAACAACATCTCTTGTTTTAAGTTCCGACATATTTGGTCGGGACAAAGACAAGAACGAGATAATAAAAAAGCTGTTAGATGATACCCGTGATGCCGAATCACCTGGGACTGTGATCCCTATTGTGGGTATGGGTGGGATAGGAAAAACTACTTTGGCTCAACTGGTTTACAATGATGCCGAAATCGTGGGAAAATTTGACACTAGAGCATGGGTTTGTGTTGCTGAAAATCCTGACCCTGTTAATGTTACAAGGACAATAATAGGGGCAATAGATTCTTCTCCCTGTAACATGGATCATTTTGATTCACTTCAGACTGATTTGAAGAAAAAATTGACAGGAATGACATTTTTAGTTGTTTTAGATGATGTCTGGGATGATCGACGAGACATGTGGGAGAATTTTCTAAAACCTTTTCAATATGGAAATGATAGAAGTAAGATTCTCCTAACAACCCGTAGTGAAAAGGTTGCTTCTGTGTTCGCAGCTAACAATCTACATTATCGACTAAGTTTATTGTCAAAGGAAGACTGTTGGTCTGTGTTTTTGAAGCATTCATCCATTTCTACTAATTCTAAACAATATGCAGCTCTAGAACCAATTGGTAGAAAAATTGTTGAAAAGTGTAAGGGGTTACCTTTGGCTGTGAAGACACTTGGGGGCTTATTGCGCAATAAGTATAATGAAGGAGCTTGGGAGAATATACTTGAATGTAAAATCTGGGAACTCTCTGAAGATGACAATATGATTGTTCCTGCATTAAGAGTTAGTTATCACTACCTCCCTTCACATTTAAAGCGGTGTTTTGTATATTGCTCATTATTTCCTGAGGATTATGAATTTGACAAAGATGAATTGATTTTGTTATGGATGGCTGAAGATCTTTTACAATCAAAGGAGAACAACACATTAGAAAAAATTGGTTGTTCTTATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAACCTTCTAGTACTCAGAGAGGGTTATTTGTAATGCATGATCTCATGCATGATCTAGCAACGTTTTTTGCTGGGAAATTCTATTTCAAACTCAAAGAATTTGGCCATCTACACAAGATAGACAACAAAACTCGTCATTTGTCATATGCTACAAAATATGAGGATAGCATCAAATTATTTCAAGGTGTCTATAATGGAGCAATACACATCAAAACATTTTTAGATCTTACTTGGCTTTGCTATGGTCAATCAATTGATATTGAAAGCGATTCTTGGCTCTTACGACAACAATTTGTGTGTTTAAGAGTTATGTCATTTAAACACTTTTCTATAGAGTCATTGCCTGATTTCATAGGTGAATTGATTCATTTGCTTTATTTGAATGTCTCTAACACACCTATTGTGACATTGTCCGAGTCATTATGTAAGTTATACAATCTCCAAACTTTGAAGTTGAGAAATTGTTTTAAGCTAGAGATGCTTCCCAGTCGCATGCAAGATCTCGTTAACCTGCACTACCTTGACATTCGAGGTGCTTTTCGTCTGAAAGAGATGCCGAAGGAAATGAGCAAGTTGAAACATCTAAACTTCTTAAGTGATTATATCATGGGCAAGCACGAAGAGAATGGGATAAGAGAATTGGGAACACTGGACAATCTTCATGGCTCATTTTGCATTTCCAACTTGGAGAACATCAAGAATAGTGGTGAAGCTTTGAAGGCAAAGATGGGTAACAAGAAGCACATTGACACTTTAACATTGAATTGGCTTCCAAACGGTGACATTGATGATTTTCAAAGTGAAAGAGATATACTTGACAAGTTACAACCTCATCAAAACTTGAAAGAGTTATCAATTGTGGGTTATCGTGGTGAAACATTCCCAGATTGTTACCCTCTTTACAGCATCTGGAGGTTTCTGATCTTGCCGCCGCTAGGGTTGGCTGAGCTCCACCTAGAGCAGCTGTATATAAACAAATGCCTAGAAATTGATTGTTTTGATGAGAAGTGTCTCCCGCAGAGTTTGGAAACACTTGAAATCAAGCAATGCCAAAAACTAGCGAGTGGGATAACATCAAAGGGTTTGCAGAGTCAAGGCCAATTCTGGAACTTTCCAAATTGGCTTCATCATCTCCGAGGCATAAGCTGGAAGACCCACGGATTCAATTCTCCTGGGACTGAAATTGACCCTAGAACACAGAGCTCTACACCAAGCTGCAACATTGGTGAGGGAGGTATTGCACTAGCTGAGTCTATACATGGTTCAGCACCTGATATTGCTGGAAAGAATTTGGCAAATCCAACTGCTTTACTGATGATTGGTGTTTCAATGTTACGGCATTTGAATATCCAGAACAAAGCGGACCACATTCAAAATGCCATCCTCAACACAATTGCAGAAGGGAGGTACCGAACTGTTGATCTTGGAGGCAAAGCAAAGACAACCGAGTTCACCAATGCGATTATTGATCATCTCTAA	2910	0.39	MAAKLEGRAYLSSFVDAVSKKLSSILEDDFVLERNDSELKLLERLDDCLCDVGPVLDDAELMQFSDERVKKWLVDLQDALYMADDFLDELSTKAATATPRDPSNSYDWSRPVDSIIEDSGVNVIEKIVAKLESSVRRKGKLCLRESAKVDFSSWRIPTTSLVLSSDIFGRDKDKNEIIKKLLDDTRDAESPGTVIPIVGMGGIGKTTLAQLVYNDAEIVGKFDTRAWVCVAENPDPVNVTRTIIGAIDSSPCNMDHFDSLQTDLKKKLTGMTFLVVLDDVWDDRRDMWENFLKPFQYGNDRSKILLTTRSEKVASVFAANNLHYRLSLLSKEDCWSVFLKHSSISTNSKQYAALEPIGRKIVEKCKGLPLAVKTLGGLLRNKYNEGAWENILECKIWELSEDDNMIVPALRVSYHYLPSHLKRCFVYCSLFPEDYEFDKDELILLWMAEDLLQSKENNTLEKIGCSYFDELVARSFFQPSSTQRGLFVMHDLMHDLATFFAGKFYFKLKEFGHLHKIDNKTRHLSYATKYEDSIKLFQGVYNGAIHIKTFLDLTWLCYGQSIDIESDSWLLRQQFVCLRVMSFKHFSIESLPDFIGELIHLLYLNVSNTPIVTLSESLCKLYNLQTLKLRNCFKLEMLPSRMQDLVNLHYLDIRGAFRLKEMPKEMSKLKHLNFLSDYIMGKHEENGIRELGTLDNLHGSFCISNLENIKNSGEALKAKMGNKKHIDTLTLNWLPNGDIDDFQSERDILDKLQPHQNLKELSIVGYRGETFPDCYPLYSIWRFLILPPLGLAELHLEQLYINKCLEIDCFDEKCLPQSLETLEIKQCQKLASGITSKGLQSQGQFWNFPNWLHHLRGISWKTHGFNSPGTEIDPRTQSSTPSCNIGEGGIALAESIHGSAPDIAGKNLANPTALLMIGVSMLRHLNIQNKADHIQNAILNTIAEGRYRTVDLGGKAKTTEFTNAIIDHL	969

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu09g00343	969	Gene3D	-	328	412	IPR042197	-
	Adu09g00343	969	Pfam	Isocitrate/isopropylmalate dehydrogenase	880	965	IPR024084	-
	Adu09g00343	969	PANTHER	DISEASE RESISTANCE PROTEIN RP	23	849	IPR044974	GO:0006952
	Adu09g00343	969	SUPERFAMILY	Isocitrate/Isopropylmalate dehydrogenase-like	880	969	-	-
	Adu09g00343	969	SMART	Iso_dh_2	669	965	IPR024084	-
	Adu09g00343	969	Gene3D	Isopropylmalate Dehydrogenase	876	969	-	-
	Adu09g00343	969	Pfam	NB-ARC domain	171	413	IPR002182	GO:0043531
	Adu09g00343	969	Gene3D	Ribonuclease Inhibitor	549	847	IPR032675	-
	Adu09g00343	969	PANTHER	OS05G0414200 PROTEIN	23	849	-	-
	Adu09g00343	969	Pfam	Rx N-terminal domain	14	97	IPR041118	-
	Adu09g00343	969	Gene3D	-	15	119	-	-
	Adu09g00343	969	Gene3D	-	151	321	IPR027417	-
	Adu09g00343	969	PRINTS	Disease resistance protein signature	365	379	-	-
	Adu09g00343	969	PRINTS	Disease resistance protein signature	194	209	-	-
	Adu09g00343	969	PRINTS	Disease resistance protein signature	619	635	-	-
	Adu09g00343	969	PRINTS	Disease resistance protein signature	267	281	-	-
	Adu09g00343	969	Gene3D	-	413	498	IPR036388	-
	Adu09g00343	969	SUPERFAMILY	L domain-like	488	832	-	-
	Adu09g00343	969	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	153	428	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu09g00343	Adu-Chr9	3688154	3692625	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu09g00343	195	832	WRKY Transcription Factor Family	AT5G45050	21.782	8.65e-10	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu09g00343	-		-	adu:107464155	1204.89