Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00334 ATGTCGCATCCCTTAGAATTGGGCCTCTCCACTTTGTTAATAGAGCTTGATGACGCTACAGAGTATTATGTGTACTTCCACTTTGGGGAAATTCAGAAACTCACGGCTGGGAGAAAAAGATTAATTAACATAGCCCTTAATTCGCAAAGCATACACTCACAACCCTTGGTTCTTGAATACCTGAAACCAGTTACTGTTGGTTCTTCATACACAGCACAAGTTAGTGCTACTTTTAGTATTAGTGCAGCGTTAGGATCGGAAGCTCCTCCTATCCTCAACGCCTTTGAGGTCTATAAGTTGATCACGCAAATCGATTCTCCAACTGACCCAAGAGATGTTGGTGGTATGAAGGACATCAAAAGTGCGTACCAGATATCTAGGTTAAGTTGGCAAGGAGATCCATGTCTTCCAGATCAATTTGCATGGGAGGGTCTCACTTGCAACTATCAAACCAATCCAAGGATCACGTCATTGAATCTGAGCTCAAGCAAACTGAGAGGGAAGATAAATTCATCATTCTCATGTCTCACGGAACTAGAATACTTGGATTTATCTAATAACGAGTTGGAAGGATCTCTGCCTGAATTTTTGGGAGATCTGTCAAAGTTAAAAGTTCTTAATTTGACAGGAAACAACCTTTCGGGTTTAATTCCTAAGGCTCTCCGAAAGAAGGTTGCAGATGCAAGTTTGCAATTAAGTGTTGGTGGTAATCCTAATCTCTGCGTAAAGGATTCATGCAACAATAAGAAGTTTGTTACACCACTCATGGCATCTCTTGCAGCAGCTTTAATTTTAATCCTTTTGATCCCTGGATTTTGGATATTCCAAAGAAGACGAAAAGAAAAAGCACATATTATTAAAGAGGGAGCATCGTTGAAATTAAAACAAGCAGCATTCACTTACAATGAGATTGTCTCTATCACTGATAACTTCAAAACAATGATTGGAGAAGGAGGATTTGGAAAAGTTTATTTTGGCATTTTACCGGATCACACTCAAGTTGCTATCAAGTTGCTTTCTCCGTCATCACGGCAAGGTTATACGGAGTTTCAATCAGAGGTACATCTTCATAGCCTTATTCGTCATAGGAACTTAGTCTCTCTCGTTGGGTATTGTGATGAAGGAGAGAATAAAGCATTGATTTATGAATATATGTCCAATGGAAATCTCCGGCAACATTTGTCAAGGCAAAACCCATATGTATTGAATTGGAATGAGAGACTCAACATAGCAATTGATGCAGTGAATGATTTGAAGACTTCAAATATATTGCTAGATGAGTGGAAGCATGCCAAGATAGCTGATTTTGGTCTAAGTAGAGCTTTTCGTAATGATATTGATTCTCACATATCAACCTGTCCTGCTGGTACCCCAGGTTATATTGATCCAGAGTTTCAAAGGGTTGGATGTTTGAATAAGAAAAGCGATATTTACAGCACTGGCATCATTCTGCTTGAGTTGATAAGCGGGAGACCTGCAATATCAAGAGAAGCCAAAGGAGAAGCCATTCACATACTTGAATGGGTTAGGCCCATATTTGAAAGTGGTGATGATGATGACATTCAAAACATTGTTGATTCAAGGTTGTTGCAAGGAGAATTCAACGTTGATTCCGCAAGAAAAGTTGTACAGATTGCAGTGTCTTGCGCTTCACCAACTGCAGCTGAAAGACCAGACATAAATCAAGTCCTTGTAGAGCTGAAGGAATGCTTATCTTTTGATACGCCTGAGGTGTCCGTACACATTGAAACTGAGTGTTCTTTGATCTCCGGTAGATAG 1779 0.398 MSHPLELGLSTLLIELDDATEYYVYFHFGEIQKLTAGRKRLINIALNSQSIHSQPLVLEYLKPVTVGSSYTAQVSATFSISAALGSEAPPILNAFEVYKLITQIDSPTDPRDVGGMKDIKSAYQISRLSWQGDPCLPDQFAWEGLTCNYQTNPRITSLNLSSSKLRGKINSSFSCLTELEYLDLSNNELEGSLPEFLGDLSKLKVLNLTGNNLSGLIPKALRKKVADASLQLSVGGNPNLCVKDSCNNKKFVTPLMASLAAALILILLIPGFWIFQRRRKEKAHIIKEGASLKLKQAAFTYNEIVSITDNFKTMIGEGGFGKVYFGILPDHTQVAIKLLSPSSRQGYTEFQSEVHLHSLIRHRNLVSLVGYCDEGENKALIYEYMSNGNLRQHLSRQNPYVLNWNERLNIAIDAVNDLKTSNILLDEWKHAKIADFGLSRAFRNDIDSHISTCPAGTPGYIDPEFQRVGCLNKKSDIYSTGIILLELISGRPAISREAKGEAIHILEWVRPIFESGDDDDIQNIVDSRLLQGEFNVDSARKVVQIAVSCASPTAAERPDINQVLVELKECLSFDTPEVSVHIETECSLISGR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00334 592 Pfam Leucine Rich repeats (2 copies) 177 216 IPR025875 -
Adu09g00334 592 PRINTS Leucine-rich repeat signature 200 213 - -
Adu09g00334 592 PRINTS Leucine-rich repeat signature 179 192 - -
Adu09g00334 592 SMART serkin_6 309 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g00334 592 ProSiteProfiles Protein kinase domain profile. 309 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g00334 592 SUPERFAMILY L domain-like 138 223 - -
Adu09g00334 592 SUPERFAMILY Protein kinase-like (PK-like) 296 572 IPR011009 -
Adu09g00334 592 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Adu09g00334 592 Gene3D Transferase(Phosphotransferase) domain 1 385 584 - -
Adu09g00334 592 Pfam Protein kinase domain 312 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g00334 592 Pfam Malectin-like domain 14 99 IPR024788 -
Adu09g00334 592 SMART LRR_typ_2 200 223 IPR003591 -
Adu09g00334 592 SMART LRR_typ_2 176 199 IPR003591 -
Adu09g00334 592 PANTHER OS07G0107800 PROTEIN-RELATED 17 578 - -
Adu09g00334 592 Gene3D Phosphorylase Kinase; domain 1 273 384 - -
Adu09g00334 592 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 17 578 - -
Adu09g00334 592 Gene3D Ribonuclease Inhibitor 116 235 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00334 Adu-Chr9 3592598 3603566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00334 19 572 Receptor kinase-like Gene Family AT1G51850 41.500 2.08e-148 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Adu09g00334 Pkinase 1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00334 - - ahf:112777739 732.635