Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00312 ATGAATCGGAGGTGCTCCGGGTGCAGCAAAAATGGTCACAACTCCAGAACATGCCCTTATTACTCATCCTCTGCGTCTCGCACCACCGTTACTACAGTGAAGCTCTTTGGGGTGCGGCTCTCCATGACCCACGGATCAGGATCATGCTCCGCCGCATCACCCAATCATAACTCTCCTTTCTCACACTACTCCTCTGACGGTTACGTGTTGGATAGTGAGCCATCAACCCCTGCTGCCACCATCAACTGCCACCATCCTCCTCCTTCCATAAACAAAGGCATTCCATGGAGCCAAGAAGAACATCGATTGTTCTTAATTGGATTGGAGAAATTAGGAAAAGGAGACTGGCGTGGAATATCTCGAAATTACGTTGTATCACGAACGCCAACTCAGGTAGCAAGTCATGCTCAGAAATACTTTATCCGGCTGCGGCAGAGCAACGCCACGCCGCGAAAACGACGATCAAGTCTTTTCGACATGTTCAAAAATTTGGCTTCGAATTCGCCTTCACTAAAAGAAGAACAAGTATTACTTCAACCTTCTAAGAACTCACAACTTAGCAATGTGGAAGAAGAGCTCAATGAAACTATAATGGTATCGAATGAAGCCACACCAGCGTCACCGCTTCCCGGATTCTTCCGGCCGCCTTATCCGGCTCTCCCATTTTCCTCATGGCCATCAAGTGCCTGTTCCTTTGGAGAAGCTACCCTAATCTTAGATGGAAGGCCATTGCATTAG 738 0.481 MNRRCSGCSKNGHNSRTCPYYSSSASRTTVTTVKLFGVRLSMTHGSGSCSAASPNHNSPFSHYSSDGYVLDSEPSTPAATINCHHPPPSINKGIPWSQEEHRLFLIGLEKLGKGDWRGISRNYVVSRTPTQVASHAQKYFIRLRQSNATPRKRRSSLFDMFKNLASNSPSLKEEQVLLQPSKNSQLSNVEEELNETIMVSNEATPASPLPGFFRPPYPALPFSSWPSSACSFGEATLILDGRPLH 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00312 245 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 91 142 IPR006447 GO:0003677
Adu09g00312 245 ProSiteProfiles Myb-like domain profile. 95 140 IPR001005 -
Adu09g00312 245 Pfam Myb-like DNA-binding domain 95 140 IPR001005 -
Adu09g00312 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 144 IPR017930 -
Adu09g00312 245 SMART sant 92 142 IPR001005 -
Adu09g00312 245 PANTHER TRANSCRIPTION FACTOR KUA1 1 195 - -
Adu09g00312 245 Gene3D - 94 145 - -
Adu09g00312 245 SUPERFAMILY Homeodomain-like 91 144 IPR009057 -
Adu09g00312 245 CDD SANT 95 140 IPR001005 -
Adu09g00312 245 ProSiteProfiles Zinc finger CCHC-type profile. 3 19 IPR001878 GO:0003676|GO:0008270
Adu09g00312 245 ProSiteProfiles SANT domain profile. 96 144 IPR017884 -
Adu09g00312 245 PANTHER OS01G0187900 PROTEIN 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00312 Adu-Chr9 3304564 3305979 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu09g00312 Myb_DNA-binding 1.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00312 - - aip:107617323 478.018