Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00311 ATGGAAAGTTTCGCCGGTGGCGGTGTTAAGGACGTGTACGGCGAGGATAGAGCCACAGAGGATCAGTTTGTGACACCATGGAGTGTTTCTGTTGCTAGTGGGTATACATTGTTGCGAGATCCTCACTTCAATAAAGGATTGGCATTCACTGAACAAGAAAGGGATGCACATTACTTGCGTGGTCTTCTTCCTCCATCAGTTATTTCTCAAGAAACTCAGGTGAAGAGACTCATTCAACTAATACGGCAGTATCAAGTACCATTGCTGAAGTATGTGGCAATGATGGATCTTCAGGAGAGCAATGAAAGGTTGTTTTATAGGCTTCTTATTGATCATGTTGAGGAGTTACTTCCTGTTGTCTACACTCCAACAGTTGGTGAAGCTTGCCAGAAATATGGCAGCATCTTCTCAAATCCTCAAGGTCTTTTTATAAGCTTGAAAGAGAAAGGGAGGATTCTTGAAGTTCTAAGGAATTGGCCTGAGATGAACATTCAAGTCATAGTTGTAACTGATGGAGAAAGGATCCTAGGTCTAGGGGACCTTGGCTGTCAGGGAATGGGAATACCAGTTGGGAAACTTTCTTTATATACAGCACTTGGAGGAGTTCGTCCTTCTGCTTGCTTGCCTATTACCATTGATGTGGGTACAAACAATGAGAAGCTGTTGAATGATGAATTATACATTGGTCTAAGGCATAAAAGAGCAACTGGCAAGGAATATGATGAACTTCTGCATGAATTCATGACTGCAGTAAAACAAAATTATGGAGAAAAAATCCTTGTTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTACTTGAAAGATATAGGTCAACACATCTTGTTTTCAATGATGATATTCAGGGAACAGCGTCGGTGGTCCTCGCCGGACTTGTCGCGGCCCTGAAATTGGTCGGAGGAAACTTAGCTGATCACAAGTTCCTCTTCCTTGGGGCTGGAGAGGCTGGCACCGGAATAGCAGAACTCATAGCCCTTGAAATATCAAAACGGACAAATATTGAAGTGGAAAAAGCTCGCAAGAACATTTGGTTGGTGGATTCAAAGGGATTGATTGTTAGTTCCAGAAAGGAATCACTTCAACATTTCAAGAAGCCTTGGGCTCATGAACATGAACCTATATCAGATCTGGTCAAAGCAGTTAATCAAATTAAGCCAACAGTATTGATTGGAACATCAGGACAAGGCCAAACTTTTACTCAAGCAGTGGTTGAGGCTATGGCCTCCAATAATGAGAAACCTATTATCCTAGCTCTTTCCAACCCAACATCACAATCAGAATGTACCGCTGAACAAGCTTATAATTGGACTAAGGGACGTGTAATTTTTGCTAGTGGAAGCCCATTTGACCCGGTTGAAATTGATGGAAAGAAACATGTGNGTTTGATAATGTCTGGAACAATCCGAGTTCATGATGACATGCTTCTAGCAGCTTCTGAGGCATTGGCTTCACAGGTGAGCAAAGAGGACTATGAAAAGGGGCTTATATATCCTCCCTTCACTAACATTAGAAAGATTTCAGCAAATATAGCTGCAAATGTGGCTGCTAAGGCCTATGAGCTTGGCTTGGCCACTCGACTTCCTCAACCAAAAGATTTGGTGAAGTTTGCTGAGAGCTGCATGTATACTCCAACCTATAGAAGCTACAGATGA 1677 0.4222 MESFAGGGVKDVYGEDRATEDQFVTPWSVSVASGYTLLRDPHFNKGLAFTEQERDAHYLRGLLPPSVISQETQVKRLIQLIRQYQVPLLKYVAMMDLQESNERLFYRLLIDHVEELLPVVYTPTVGEACQKYGSIFSNPQGLFISLKEKGRILEVLRNWPEMNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLRHKRATGKEYDELLHEFMTAVKQNYGEKILVQFEDFANHNAFDLLERYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHKFLFLGAGEAGTGIAELIALEISKRTNIEVEKARKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPISDLVKAVNQIKPTVLIGTSGQGQTFTQAVVEAMASNNEKPIILALSNPTSQSECTAEQAYNWTKGRVIFASGSPFDPVEIDGKKHVXLIMSGTIRVHDDMLLAASEALASQVSKEDYEKGLIYPPFTNIRKISANIAANVAAKAYELGLATRLPQPKDLVKFAESCMYTPTYRSYR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00311 558 Gene3D - 287 558 - -
Adu09g00311 558 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 6 558 - -
Adu09g00311 558 Pfam Malic enzyme, N-terminal domain 98 279 IPR012301 GO:0004471
Adu09g00311 558 ProSitePatterns Malic enzymes signature. 285 301 IPR015884 GO:0004471
Adu09g00311 558 Pfam Malic enzyme, NAD binding domain 289 526 IPR012302 GO:0051287
Adu09g00311 558 SMART Malic_M_2 289 527 IPR012302 GO:0051287
Adu09g00311 558 PRINTS Malic enzyme signature 104 128 IPR001891 GO:0004470|GO:0004471
Adu09g00311 558 PRINTS Malic enzyme signature 164 193 IPR001891 GO:0004470|GO:0004471
Adu09g00311 558 PRINTS Malic enzyme signature 200 222 IPR001891 GO:0004470|GO:0004471
Adu09g00311 558 PRINTS Malic enzyme signature 260 278 IPR001891 GO:0004470|GO:0004471
Adu09g00311 558 PRINTS Malic enzyme signature 285 301 IPR001891 GO:0004470|GO:0004471
Adu09g00311 558 PRINTS Malic enzyme signature 316 332 IPR001891 GO:0004470|GO:0004471
Adu09g00311 558 PRINTS Malic enzyme signature 419 435 IPR001891 GO:0004470|GO:0004471
Adu09g00311 558 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 13 288 IPR046346 -
Adu09g00311 558 SMART malic_2 98 279 IPR012301 GO:0004471
Adu09g00311 558 Gene3D - 32 286 IPR037062 GO:0004471
Adu09g00311 558 CDD NAD_bind_1_malic_enz 289 552 - -
Adu09g00311 558 PIRSF ME 10 558 IPR001891 GO:0004470|GO:0004471
Adu09g00311 558 PANTHER MALIC ENZYME-RELATED 6 558 - -
Adu09g00311 558 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 289 557 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00311 Adu-Chr9 3291242 3298122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00311 K00029 - gmx:100791514 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00311 09 3291242 3298122 Adu09g00311 09 3291242 3298122 ECH
Adu09g00311 09 3291242 3298122 Adu07g01770 07 52961229 52967193 ECH
Adu03g01866 03 32690284 32694457 Adu09g00311 09 3291242 3298122 ECH
Adu08g00871 08 16245153 16249381 Adu09g00311 09 3291242 3298122 ECH
Adu09g00311 09 3291242 3298122 Adu08g00871 08 16245153 16249381 ECH
Adu09g00311 09 3291242 3298122 Adu05g03442 05 106848085 106851214 ECH
Adu09g00311 09 3291242 3298122 Adu02g00245 02 2757934 2759567 ECH
Adu09g00311 09 3291242 3298122 Adu04g02505 04 111275460 111277935 ECH
Adu07g01770 07 52961229 52967193 Adu09g00311 09 3291242 3298122 PCT