Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00272 ATGGAAGTGCCGGAATACTTCGTCGGTGGCTATTACGGCGCCGGAGGAGACCAATTCTCAACGGAGAAGCGGCACGGCGTCGGCGGTGGTGACCAGAAGCACGGTGGTTATGGCGGCGGTGGTGAGCCGTTTGCCATTGACGACCTACTTGATTTCTCCAACGCCGACGCCATCATGTCCGACGGATACTCCTCCACCGACTCGTCCAACGTCACCGCGGTTGACAGCTGTAACTCCTCCGTCTCCGGTGGCGACAACCATTTCCCTGCCGGCATTGTCCCTCGCGCATTCTCCTCCGGCGATCCACAATTCTCCGGCGGTGATCTCTGCGTTCCGTACGATGACATGGCGGAACTGGAGTGGCTCTCGAACTTCGTGGAGGACTCGTTCTCCACCGAAGAAGATCTGAAAACGCTGCAGCTTCTCTCCGGCGGTGGCGCCACTGCCATCAACGGCAGAAAACCTCAGACGCCGGAGTCATCATCTTCCTCGGAAAACGCGCTCCATCCTCCATTTGATACCGCGCGAAACGCACCGTTTCTTCTTCATCAGGAGACGCCGCTTCCAGGCAAAGCTCGCAGCAAGCGCTCACGCGCGGCGCCGGGGGATTGGTCCACGCGCTTGCTTCACCTCTCGACTCCTCCGCCGCCGAAACTCCAGACGTCTGCGGCGGAGCATAAGCCTCCGACACCGAAAGTGGCGGCACCGACGACGACGAAGAGGAGGGAGGCGAATGCGGAGTGTTTGGGGAGAAAGTGTCTACACTGCGGCGCAGATAAGACGCCACAGTGGCGAACAGGGCCCATGGGCCCAAAGACTCTGTGCAACGCTTGCGGTGTGAGGTTTAAGTCGGGCCGACTTGTGCCTGAGTACAGGCCCGCGGCGAGCCCAACGTTCGTTTCAACGAAGCACTCGAATTCTCATAGGAAGGTTCTGGAACTGAGGCGGCAGAAGGATTTGCAGCGGCAGCATCAGCAGCAGCAGCAACTGATGAGTCAAACTTCCATTTTTGGTGTATCCAACGGTGGAGATGAGTTCTTAATCCATCATCATCATCATCATCCCCATCATCATCAACAACACCATTGTGGCCCTGATTTTAGGCATGTTATCTAG 1116 0.5771 MEVPEYFVGGYYGAGGDQFSTEKRHGVGGGDQKHGGYGGGGEPFAIDDLLDFSNADAIMSDGYSSTDSSNVTAVDSCNSSVSGGDNHFPAGIVPRAFSSGDPQFSGGDLCVPYDDMAELEWLSNFVEDSFSTEEDLKTLQLLSGGGATAINGRKPQTPESSSSSENALHPPFDTARNAPFLLHQETPLPGKARSKRSRAAPGDWSTRLLHLSTPPPPKLQTSAAEHKPPTPKVAAPTTTKRREANAECLGRKCLHCGADKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSTKHSNSHRKVLELRRQKDLQRQHQQQQQLMSQTSIFGVSNGGDEFLIHHHHHHPHHHQQHHCGPDFRHVI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00272 371 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 250 310 - -
Adu09g00272 371 Gene3D - 249 333 IPR013088 GO:0006355|GO:0008270
Adu09g00272 371 MobiDBLite consensus disorder prediction 153 170 - -
Adu09g00272 371 PANTHER GATA TRANSCRIPTION FACTOR 9 1 371 - -
Adu09g00272 371 ProSiteProfiles GATA-type zinc finger domain profile. 247 283 IPR000679 GO:0006355|GO:0043565
Adu09g00272 371 SMART GATA_3 247 297 IPR000679 GO:0006355|GO:0043565
Adu09g00272 371 MobiDBLite consensus disorder prediction 146 174 - -
Adu09g00272 371 Pfam GATA zinc finger 253 286 IPR000679 GO:0006355|GO:0043565
Adu09g00272 371 MobiDBLite consensus disorder prediction 352 371 - -
Adu09g00272 371 CDD ZnF_GATA 252 299 IPR000679 GO:0006355|GO:0043565
Adu09g00272 371 ProSitePatterns GATA-type zinc finger domain. 253 278 IPR000679 GO:0006355|GO:0043565
Adu09g00272 371 PANTHER GATA TRANSCRIPTION FACTOR 1 371 - -
Adu09g00272 371 MobiDBLite consensus disorder prediction 186 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00272 Adu-Chr9 2910962 2912517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00272 37 371 C2C2-Gata Transcription Factor Family AT4G32890 42.571 7.35e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Adu09g00272 GATA 2.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00272 - - aip:107619293 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00272 09 2910962 2912517 Adu09g00272 09 2910962 2912517 ECH