Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00269 ATGACACAAACAACTTCATCATCTTCATCTTCTTCTTCTTCAGAAACATCTACTACCAGCACCATTTCACCACCACCCTCACCTTCACCCTCCTCATCTTCTTCTTCTTCCAAGAAGCAAAAAACAGAGCATGCCAACAAGGACCCCAAGAGACCAAGAGACTGCAGCAAGCACCCCCTCTACCATGGCGTCCGCAAGCGCAATTGGGGCAAATGGGTCTCCGAAATCCGCGAGCCTCGCAAGAAATCTAGGATTTGGCTTGGAACTTTCGCCACGCCGGAGATGGCTGCCAGAGCACACGACGCTGCAGCCACAGCCGCAGCCTCCATGGTCAAATTTGACTCTATTGCTGCTGCGGAACAGCCTCAGCACCACCCAGACACGTCTGATGATGCTGAGACTTGCTCGCAGCAGCAAGAGGCAGAACCATCGTCATCATTGTCAATGTCTAGAGAGACGGATTCGTCTGAACTGAGCGAGATAGTTGAGCTTCCGAACATTGAAGATGATGAAGGGTTTGACTCGGTTGAGTCATCAAGGAGCGAGTTCATGTGGTTCGACATGGTCGATAACTGCAATGGTTGGGTGTATGATCCTCCAATGGGGTTAGAGGGTGCTGAATTCTGCGCAAATTTCATTGCTGATAGTAACTCTTTGATACCCATTTGGGATGATTGA 678 0.4985 MTQTTSSSSSSSSSETSTTSTISPPPSPSPSSSSSSSKKQKTEHANKDPKRPRDCSKHPLYHGVRKRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDAAATAAASMVKFDSIAAAEQPQHHPDTSDDAETCSQQQEAEPSSSLSMSRETDSSELSEIVELPNIEDDEGFDSVESSRSEFMWFDMVDNCNGWVYDPPMGLEGAEFCANFIADSNSLIPIWDD 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00269 225 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 206 - -
Adu09g00269 225 MobiDBLite consensus disorder prediction 40 61 - -
Adu09g00269 225 MobiDBLite consensus disorder prediction 1 75 - -
Adu09g00269 225 Gene3D AP2/ERF domain 60 110 IPR036955 GO:0003700|GO:0006355
Adu09g00269 225 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Adu09g00269 225 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Adu09g00269 225 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 22 206 - -
Adu09g00269 225 SUPERFAMILY DNA-binding domain 60 107 IPR016177 GO:0003677
Adu09g00269 225 Pfam AP2 domain 59 104 IPR001471 GO:0003700|GO:0006355
Adu09g00269 225 SMART rav1_2 60 120 IPR001471 GO:0003700|GO:0006355
Adu09g00269 225 MobiDBLite consensus disorder prediction 119 163 - -
Adu09g00269 225 MobiDBLite consensus disorder prediction 1 22 - -
Adu09g00269 225 CDD AP2 59 95 IPR001471 GO:0003700|GO:0006355
Adu09g00269 225 MobiDBLite consensus disorder prediction 132 155 - -
Adu09g00269 225 ProSiteProfiles AP2/ERF domain profile. 60 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00269 Adu-Chr9 2853788 2854595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00269 31 202 AP2-EREBP Transcription Factor Family AT5G11590 44.221 1.07e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu09g00269 AP2 7.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00269 K09286 - ahf:112712788 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00269 09 2853788 2854595 Adu09g00269 09 2853788 2854595 ECH