Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00260 ATGATGGCTGGGAACCCTAATAATTGGTGGAGCATGAATCCATCTTCTTTGATCCCTTATACTCAATATGTGCTTGGATCTTCTTCTTCTTCAATTCCTTTCAATCCTTTGGTGGCAGAAATTCCAGAACCTTCTCCTCAGTCTTGGAGCCAACTTCTTTTCACTGGGTTACCAGGAGAAGAAGAGAGACTTGGATTCAATCATTTTCATCAATCAAAAAAGTTAGAAAACTGGGATGACCATAATATCCTCATCAACAACAACAATAATCAACACAACACAAGAGTTGGTCCTAATAATAATAATATGATTGTTGATGGAATAATAAAGCAAGAGGTTTCCCAAAGTGGCAACTTGTACGGCCAAGAAGAGTTTCATGCTTCTAATGGGTCAACTTGGTCAACACATATGGTTCCCATTAATTCTTCATCACCTAGGTCAAGTGTCACTACCAATAATAATAACAATAATAATTTATTGGATTTCTCTTATAACAAGGTTGATCATAGCAAGAACCAACTACCTTATGCCACACCTCAGTGTAATAGCACATCCAGTGCTGGAATTTGCAAGAAAGCTAAGGGTCAATCAACTTCAAGCTTACCACCATTGAAGGTGAGAAAGGAGAAGCTTGGTGATAGAATAACAGCACTTCACCAGCTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTGTTGTTAGAAGCCATTGGATATATTAGATTCCTTCAGAGTCAAATTGAGGCACTTAGTTCTCCTTACTTAGGCAATGGATCAAAAAACATGAGAAGTCAACAGTATGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGATACTGGCCTGAAAAGAAAGGCAGCTTCAAGCCAGGATTCAAAAGATAATAAGGCAAAGGATTTGAGGAGTAGAGGATTGTGCTTGGTACCTGTGTCCTTCACCCAACATGTTGGAAATGAAAATGGAGCTGATTTCTGGGCACCTGCATATGGTAGTGGATTCTAA 1026 0.3938 MMAGNPNNWWSMNPSSLIPYTQYVLGSSSSSIPFNPLVAEIPEPSPQSWSQLLFTGLPGEEERLGFNHFHQSKKLENWDDHNILINNNNNQHNTRVGPNNNNMIVDGIIKQEVSQSGNLYGQEEFHASNGSTWSTHMVPINSSSPRSSVTTNNNNNNNLLDFSYNKVDHSKNQLPYATPQCNSTSSAGICKKAKGQSTSSLPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSSPYLGNGSKNMRSQQYVHGERNSVFPEDPGQLLNDTGLKRKAASSQDSKDNKAKDLRSRGLCLVPVSFTQHVGNENGADFWAPAYGSGF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00260 341 Gene3D - 205 267 IPR036638 GO:0046983
Adu09g00260 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 256 IPR036638 GO:0046983
Adu09g00260 341 CDD bHLH_AtbHLH_like 205 252 IPR045239 -
Adu09g00260 341 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 328 - -
Adu09g00260 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Adu09g00260 341 PANTHER OS05G0228400 PROTEIN 32 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00260 Adu-Chr9 2776759 2782332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00260 159 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 60.150 3.36e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00260 - - aip:107617848 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00260 09 2776759 2782332 Adu09g00260 09 2776759 2782332 ECH