Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00238 ATGGGAATGGACATGTCTTCAAACACCAATAAGGACTTGTTCTCCTCTCCAACTCTCTCCCTCACCCTTGCTGGGATTTTTAATAACCAAGTAGAGGAAGTAGGAGATGAGGGAAGTAGAGAGTGTTCAAGGAAAGAGGACACCACCACCACCACCACCGTTGATGTAAGCAGCGAGAATTCTGGGCCGTTGAGATCAAGATCAGAGGATGATGATGAGGATGGTGGTGATGACGATGGGAGCAAGAAGAAGAAGAAAAGAAGGAAGTATCATAGACACACCGCTGAGCAGATCAGAGAAATGGAAGCGGTTTTCAAAGAATCTCCCCATCCAGATGAAAGCCAAAGGAAACAACTCAGCAAGCAATTAGGCCTTGCTCCAAGTCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGTCATGAAAGTTCGTTGTTGAAGAAAGAAATAGAGAAATTAATGGAGGAAAATAAGGCCATGAGAGAGGCCATAAGCAAATCTTGTTGCCCTAACTGTGGCATGGCCATGGCCACCACTCCTACTATCACTGATGATAGCTCCACCATCTCCATTGAAGAACAACAACTTCGTTTAGAAAATGCCAAACTCAAAGCTGAGGTAGAGAAGCTACGAGAAGTTTCAGGGAAATACCCATCAGCTGGAACAATAATGTACCCTTCATGTTCTACTAGCCATGAGCAAGTAGATAATAATAGAATAAACTCATCAATGGATTTTTACAATGGAATTTTTGGGGTTGAAAAATCAAGGATAATGGAGATAGTGAACCAAGCAATAGAGGAACTCATAAAGATGGCTACTATTGGAGAACCTTTATGGGTACGTAGTGTTGAAACTGGTAGAGAAATACTCAACTATGATGAATATGAGAAGGTTTTTGAGGTTCACAATAATTCAAGAATTATTGGAAGAAGGTCAAACATGTCCATTGAAGCATCAAGAGAAAATGGAATTGTTTTTATGGATCTATCAAGTCTTGTCCAAAGTTTTCTAGATGTGAATCAATGGAAGGAGATGTTTCCATGCTTAATATCAAAGGCTGCAAATGTTGATGTTATATGCAATGGAGAAGGATCTAATCGCAATGGTGTTGTTCAACTGATGTTTGCTGAGTTGCAAATGCTGACACCAATGGTGCCAACAAGAGAAGTATATTTCGTGAGATGCTGCAGAAAGTTAAGTGATGAAAAGTGGGGAATTGTTGATGTTTCCATAGACAAAGTAGAAGACAACATCGATGCTTCCCTTCTTAAATGCAGAAAACGCCCTTCTGGTTGCATTATTGAAGATAAGTCCCATGGTCATTGCAAGGTAAGTTGGGTGGAACACTGGGAATGCGAGAAAAGCAGTGTCCACAGAATGTATAGAAGCATTGTGAATAACGGTACAGCGTTTGGGGCAAGGCACTGGATATCAACACTGCAGCTTCAATGTCAACGTCTTGTTTTCTTCATGGCAACTAATGTTCCCATCAAGGATTCAACTGGTGTTGCCACATCAGCTGGAAGAAAGAGCATATTGAAGTTAGGAGAAAGAATGAGATGGAGTTTTTGCCATGCAATTGGAGCCTCAAGCTTCCATACATGGACAAAGGTGACAAGTAAAAATGGAGAAGACATTAGGATCAGTTCTAGGAAGAACTTGAATGATCCTGGTCAACCTCTTGGTGTCATCCTATCAGCTGTTTCTTCTGTGTGGCTTCCTCTCCCTCCAAATGTTCTTTTTCATTTCTTGAGGGATGAAAATCATAGGTCTCAGTGGGATATCATGGTCACTGGTGGGTCATCGGTGCAGTCCATAGCAACATTAGCCAAAGGCCAAGATCGGGGCAATGCTGTAAATATCCATGAGATTACATCAAAAGAAAACATCAAGTGGTGGATATTACAAGATAGCTCCACAAATGCTTATGAATCAATGGTAGTGTATGCTCCTGTGGACATTCCTAGCATGAAGAATGTGATGAATGGATGTGATTCAACCAACATTCCAATATTACCATCAGGGTTCTCAATTCTCCCTGATGGGGTTGATTCAAGGCCATTGATTACTTCAACTACTATGATGCAACAACAACAACAAGAAGAAAATATGAATACTGAAGAAGGAGGAGGGTCTTTGTTAACAATGGCATTCCAAGTAATTACTAATAATAATAGTAATGGTTCTCCATCATCAGCAAAATTGACTTTGGAGTCTGTGGAATCAGTCAAGAGTTTAGTTTCTTGTACATTAAGGAATATCAAATCATGTTTACAATGTGAAGAAGATTGA 2316 0.4041 MGMDMSSNTNKDLFSSPTLSLTLAGIFNNQVEEVGDEGSRECSRKEDTTTTTTVDVSSENSGPLRSRSEDDDEDGGDDDGSKKKKKRRKYHRHTAEQIREMEAVFKESPHPDESQRKQLSKQLGLAPSQVKFWFQNRRTQIKAIQERHESSLLKKEIEKLMEENKAMREAISKSCCPNCGMAMATTPTITDDSSTISIEEQQLRLENAKLKAEVEKLREVSGKYPSAGTIMYPSCSTSHEQVDNNRINSSMDFYNGIFGVEKSRIMEIVNQAIEELIKMATIGEPLWVRSVETGREILNYDEYEKVFEVHNNSRIIGRRSNMSIEASRENGIVFMDLSSLVQSFLDVNQWKEMFPCLISKAANVDVICNGEGSNRNGVVQLMFAELQMLTPMVPTREVYFVRCCRKLSDEKWGIVDVSIDKVEDNIDASLLKCRKRPSGCIIEDKSHGHCKVSWVEHWECEKSSVHRMYRSIVNNGTAFGARHWISTLQLQCQRLVFFMATNVPIKDSTGVATSAGRKSILKLGERMRWSFCHAIGASSFHTWTKVTSKNGEDIRISSRKNLNDPGQPLGVILSAVSSVWLPLPPNVLFHFLRDENHRSQWDIMVTGGSSVQSIATLAKGQDRGNAVNIHEITSKENIKWWILQDSSTNAYESMVVYAPVDIPSMKNVMNGCDSTNIPILPSGFSILPDGVDSRPLITSTTMMQQQQQEENMNTEEGGGSLLTMAFQVITNNNSNGSPSSAKLTLESVESVKSLVSCTLRNIKSCLQCEED 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00238 771 Pfam Homeodomain 87 142 IPR001356 GO:0003677
Adu09g00238 771 CDD START_ArGLABRA2_like 262 493 - -
Adu09g00238 771 MobiDBLite consensus disorder prediction 49 63 - -
Adu09g00238 771 Coils Coil 198 220 - -
Adu09g00238 771 CDD homeodomain 91 142 IPR001356 GO:0003677
Adu09g00238 771 Coils Coil 143 173 - -
Adu09g00238 771 MobiDBLite consensus disorder prediction 31 97 - -
Adu09g00238 771 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 12 769 - -
Adu09g00238 771 SMART START_1 267 494 IPR002913 GO:0008289
Adu09g00238 771 SUPERFAMILY Homeodomain-like 75 145 IPR009057 -
Adu09g00238 771 ProSiteProfiles START domain profile. 258 497 IPR002913 GO:0008289
Adu09g00238 771 Gene3D - 74 161 - -
Adu09g00238 771 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Adu09g00238 771 MobiDBLite consensus disorder prediction 34 48 - -
Adu09g00238 771 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Adu09g00238 771 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 12 769 IPR042160 -
Adu09g00238 771 SUPERFAMILY Bet v1-like 261 494 - -
Adu09g00238 771 SUPERFAMILY Bet v1-like 514 692 - -
Adu09g00238 771 SMART HOX_1 86 148 IPR001356 GO:0003677
Adu09g00238 771 Pfam START domain 268 494 IPR002913 GO:0008289
Adu09g00238 771 Gene3D - 273 494 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00238 Adu-Chr9 2558980 2572686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00238 56 770 Homeobox Transcription Factor Family AT1G79840 59.728 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu09g00238 START 2.1e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00238 K09338 - qsu:111988083 1007.28