Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00200 ATGCTCTCGATCGGAGGAGTATCCAGTACATCCCAATTGACTTCTTCTAAAGATGCTAAAAATGTTTCTGATTATCTCTGGAACAATTTCTTGGGTGGTAACTCATCTTCGCGCCCTTTTGGGGACGCAGTGTTAGATGGGATAGAATTCAACCCAGGTGATAATGGATACTCAATATACTGGATGGACCTTGCGCGTTACCTCAAGTCCAACTCAACACAAAATGTTTCTATAGGTGCAGCTCCTCAATGCCCCCTTGTTAGTGCTGAGAACTCTACCTTTAGTAGTGGATATTTCGATTATCTTTCGGTACAATTCTACAACAATCCTCCATGCAATTTTGTGAGTGGCAATACTAGTGGCTTCATAAATGCATGGCACCAATGGAGCAATTTGAAAGTGAAGAAAATATTTCTGGGGTTGGCAGCATCTTCTGATGAAGCTGCAATATTTCTGGGGTTGCCAGCATCTTCTGATGAAGCTGCATCTGGCTATATTCCTGCAAATTTGTTAATTTCTCAGGTCCTTCCTATCGTAAGGAACTCATCTAATTATGGAGGCATAATGTTGTGGGACAGATACAGCGATGTTAAGAGCAGATATAGTGATTTCATCGAATTCAATACAGGAGCGCAAGCATCCACACCTGCCGAAAGGAACAAAACCCACAAAGAAGGGAAAGCACCCATTCCTGTGGAAAGCATCAAACCTCATGCAGGAAATGGAAAACGCCATCTAGTTATAAGGATAGTTATTGGCGTGGGATCTGCCATTACAATATGTTTAATTTGCTACTTGAGCTGTGTATGTTGGAGGAAGTACAAAGCAGAAGTGGATACAAGAAACAGGCAAAGGAAGCTAATACATGACATTGGAGGTGCTGCAATGCTTTCCAGGATGAATTACATAGCAAAAAAGTTTAAAAGAGAGGCTAATGCAGGCGATGAGATTGAAATATTCAGTTTTGAAAGCATGGTCGCTGCTACAAACAATTTCTCAAGCTCAAATAAGCTTGGTGAAGGAGGATTTGGACCTGTTTATATGGGTAGATTGACAAACCAACAAGAAATTGCGATAAAGCGACTCTCTAAGAGTTCGGGGCAAGGGTTAACAGAGTTTAAGAATGAAGCTAAACTCATTGCAAAACTGCAGCACACTAATCTTGTGAAGCTTATTGGGCTCTGCATCCAAAGAGAAGAGAGAATGTTGGTCTATGAGTACATGTCCAACAGAAGCTTAGACTTGCACTTATTTGATGCTGAAAGAAGGAATGTTTTGGATTGGGAAAAGCGGCTTAACATCATAGAAGGCATTGCTCAAGGACTATTATATCTTCACAAGTATTCAAGGCTAAAAGTGATTCATCGTGATTTGAAAGCCGGCAACATCTTACTTGACGATGAGATGAAACCTAAGATATCGGATTTTGGCATGGCTAGAATACTAGGACTAACAGGTTCTGAAGAAAAAACAAACCGAATTGTTGGAACACATGGTTACATGTCTCCAGAGTATATGTTAAATGGCGTCGTCTCCCCAAAAGTAGACGTTTTCAGCTTTGGCGTATTGCTGCTAGAGATTCTCAGTGCAAAAAAGAATAACTCCTCTTACAACCCTGATTTTCCACTACTCAATCTAATTGGACATGCATGGAAGTTATGGAATGAAGGTAAAGCTTTAGAGCTAATGGACCATGGATTAAATGAAACATGCAACACTAAAGAAGTATTGAGATGTATCCACATTGGCCTATTGTGTGTGCAAAACGTTCCAACAGATAGACCCACCATGGTTGATGTTGTCTCTTTTTTGTCAAATGATGCTATTCAACTTGCTCAGCCAAAGCAGCCAGCATTCTTCATCAATGTTGATACAAACCAACAACAATTGCATACTAACACAAAAGAAATTTTCTCCAAAAATAGTTTAACATTATCTGATGTGGATGGCAGATGA 1956 0.4008 MLSIGGVSSTSQLTSSKDAKNVSDYLWNNFLGGNSSSRPFGDAVLDGIEFNPGDNGYSIYWMDLARYLKSNSTQNVSIGAAPQCPLVSAENSTFSSGYFDYLSVQFYNNPPCNFVSGNTSGFINAWHQWSNLKVKKIFLGLAASSDEAAIFLGLPASSDEAASGYIPANLLISQVLPIVRNSSNYGGIMLWDRYSDVKSRYSDFIEFNTGAQASTPAERNKTHKEGKAPIPVESIKPHAGNGKRHLVIRIVIGVGSAITICLICYLSCVCWRKYKAEVDTRNRQRKLIHDIGGAAMLSRMNYIAKKFKREANAGDEIEIFSFESMVAATNNFSSSNKLGEGGFGPVYMGRLTNQQEIAIKRLSKSSGQGLTEFKNEAKLIAKLQHTNLVKLIGLCIQREERMLVYEYMSNRSLDLHLFDAERRNVLDWEKRLNIIEGIAQGLLYLHKYSRLKVIHRDLKAGNILLDDEMKPKISDFGMARILGLTGSEEKTNRIVGTHGYMSPEYMLNGVVSPKVDVFSFGVLLLEILSAKKNNSSYNPDFPLLNLIGHAWKLWNEGKALELMDHGLNETCNTKEVLRCIHIGLLCVQNVPTDRPTMVDVVSFLSNDAIQLAQPKQPAFFINVDTNQQQLHTNTKEIFSKNSLTLSDVDGR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00200 651 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 212 IPR001223 GO:0005975
Adu09g00200 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Adu09g00200 651 MobiDBLite consensus disorder prediction 215 234 - -
Adu09g00200 651 PANTHER OS01G0783800 PROTEIN 224 620 - -
Adu09g00200 651 ProSiteProfiles Protein kinase domain profile. 332 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g00200 651 Pfam Glycosyl hydrolases family 18 1 196 IPR001223 GO:0005975
Adu09g00200 651 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 224 620 - -
Adu09g00200 651 Pfam Protein tyrosine and serine/threonine kinase 335 604 IPR001245 GO:0004672|GO:0006468
Adu09g00200 651 SUPERFAMILY (Trans)glycosidases 1 204 IPR017853 -
Adu09g00200 651 Gene3D Transferase(Phosphotransferase) domain 1 408 620 - -
Adu09g00200 651 Gene3D Glycosidases 1 208 - -
Adu09g00200 651 SUPERFAMILY Protein kinase-like (PK-like) 315 636 IPR011009 -
Adu09g00200 651 Gene3D Phosphorylase Kinase; domain 1 305 407 - -
Adu09g00200 651 CDD STKc_IRAK 338 604 - -
Adu09g00200 651 SMART serkin_6 332 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00200 Adu-Chr9 2166781 2171234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00200 310 622 Receptor kinase-like Gene Family AT4G11530 54.717 1.48e-117 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu09g00200 PK_Tyr_Ser-Thr 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00200 - - adu:107464041 1276.15