Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00183 ATGGATGGAACTGAGGATGATGATCTAAGGTATCCCTCTAACCCATATGGTGTTAATCACCAGGGTTATGGCTATCTGAGTCATAGGAGACTTCCGGTTCGGACTTCGCAGTATCTTCAGCCAGTTGCAAATGATTTTGTGGAACATAATGACAATGCCAATGATAATGAGGAGGAGAAGGAGGATGAAGAAGATGAAGATGAAGAACAGATAATAGAAGAAGATCATGATGATGGTGATGATGTTGATTCCCAAAGGAATGCTGTCCCCAACAATGTTGAGGAAGGTGATGATGAAGACAGGGATGGGGATGAAATTGGTGGTAACAATGATGATGGCGAGGAGGAGGATGATGAGGAGGATGAGGAAGATGATGATGATGCTAAGCCGAAAATATATAGCATGAAGGTTGATGATGATATGGAGTGGCACCCGAAAAAGCGAAAGCTGAAGAGTTTGATTTCAGCTTATGAATTTGCACCCCGGGTACCAGTGCCATCGGCAGCGGCTCCTTCAACCCCTAAACCATCTTCTGGTGGTAGGAACTCCCTTACTGATTGGACCGAGCGCGAGACTTTCGTTCTTCTTGATGCTTGGGGTGATAAGTTTCTTCAACATGGGAGGAAGAGTCTTCGGTCTGAGGAATGGCAAGAAGTTGCAGAGAAGGTATCAAAAGTTTCCAAGATTGAAAGGAAAGATGCTCAGTGTCGAAACCGGTTAGATACCTTGAAGAAGAAGTACAAGAAGGAGAAGGCTAAATCAGAGAAAATGGGTAGTGGAACTTGCAAGTGGGTTTATTTTCAGAGGATGGATAAGCTGATGTCCTCTCCAGTGCAGCAACCAGGTCTCTCATGCGGTTTGGACTCCGGAGAATATGTGTTTACGAATCCTCGAGTCTATTTGAACCGCGCAAATGGGTTTGATCAGATGAGGGATAGTCCTGGAAATTCTGAATCCTTTGGCGAACAAGGTTCAAATGGACATAAACATAAGAAAAGAAGGTATGCAAGGTACAGCAACGATGATGCATCCTCATTCAGATTGCTTGCTAATTCCATTCAGAAATTCGGCGAGATATATGAGAAGATTGAGAACAGTAGAAGGCAGCAGATGGTGGAACTGGAAAAGATGAGGATGGAGTTCCATAAGGATCTTGAAACACAAAAGAGGCAGATCCTAGAGAGAGTTCAGAGTGAAATTTCAAAACTACATCAGAGAGATGATGATGAGGAGGAGAATGATGACTAG 1248 0.4367 MDGTEDDDLRYPSNPYGVNHQGYGYLSHRRLPVRTSQYLQPVANDFVEHNDNANDNEEEKEDEEDEDEEQIIEEDHDDGDDVDSQRNAVPNNVEEGDDEDRDGDEIGGNNDDGEEEDDEEDEEDDDDAKPKIYSMKVDDDMEWHPKKRKLKSLISAYEFAPRVPVPSAAAPSTPKPSSGGRNSLTDWTERETFVLLDAWGDKFLQHGRKSLRSEEWQEVAEKVSKVSKIERKDAQCRNRLDTLKKKYKKEKAKSEKMGSGTCKWVYFQRMDKLMSSPVQQPGLSCGLDSGEYVFTNPRVYLNRANGFDQMRDSPGNSESFGEQGSNGHKHKKRRYARYSNDDASSFRLLANSIQKFGEIYEKIENSRRQQMVELEKMRMEFHKDLETQKRQILERVQSEISKLHQRDDDEEENDD 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00183 415 Coils Coil 226 246 - -
Adu09g00183 415 Coils Coil 46 74 - -
Adu09g00183 415 MobiDBLite consensus disorder prediction 55 80 - -
Adu09g00183 415 MobiDBLite consensus disorder prediction 128 144 - -
Adu09g00183 415 MobiDBLite consensus disorder prediction 1 23 - -
Adu09g00183 415 MobiDBLite consensus disorder prediction 306 337 - -
Adu09g00183 415 MobiDBLite consensus disorder prediction 162 185 - -
Adu09g00183 415 Coils Coil 393 413 - -
Adu09g00183 415 Pfam Myb/SANT-like DNA-binding domain 186 273 IPR044822 -
Adu09g00183 415 PANTHER OS01G0718900 PROTEIN 69 411 - -
Adu09g00183 415 MobiDBLite consensus disorder prediction 36 144 - -
Adu09g00183 415 Gene3D - 187 249 - -
Adu09g00183 415 MobiDBLite consensus disorder prediction 309 323 - -
Adu09g00183 415 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 69 411 IPR044823 -
Adu09g00183 415 Coils Coil 360 380 - -
Adu09g00183 415 MobiDBLite consensus disorder prediction 396 415 - -
Adu09g00183 415 MobiDBLite consensus disorder prediction 95 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00183 Adu-Chr9 1992692 1994888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00183 346 406 Trihelix Transcription Factor Family AT3G14180 49.180 1.63e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu09g00183 Myb_DNA-bind_4 1.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00183 - - tcc:18595893 421.009