Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00139 ATGAAGAAGGAGAAAGAGAAGGCAAAAAACGAAAGAAAAGAAGAAGAAGAAGAGGAGGAAGAGGAAGAAGAATGTGCAGCAAGAAGAAGAAGACGGTGTAGTGAAATTGTGCAGTATGGATCTGTATTGATGGAGAAGGAGCTTTCTAGCTTTAAATCAGTTATTAAGTCATTCATGGTTTTAATCATAACCGCGCTGGCCATGGGGGAGACATTGGCAATGGCGCCGGACATGCTGAAAGGAAATCAAATGGCTGCATCAGTTTTTGAAGTGATGGATAGAAGAACAAAGTTCCTTCAGGGAAGACTGTGTCCTTCCCAAGGACACAGTGGAAGAGTAATGATTGATGGAAAAGACATCAAGAATCTAAACCTAAAATCTGTTAGGAAACACATTGGTTTTGTGCAACAAGAACCAGTTCTTTTCGCAACATCAATTTATGATAATATTCTTTATGGGAAGGAAGGAGCATCTGATTCAGAAATAGTTGAAGCAGCTAAGCTTGCAAATGCTCATAGCTTTATCAATGGTTTTCCTGAGGGCTACTCCACCAAAGTAGGGGAAAGAGGAGTTCAACTTTCTGGTGGTCAGAAACAAAGGATAGCTATTGCCAGGGCAATCTTGAAAAACCCTGCAATCTTGTTGCTCGATGAGGCCACTAGCGCGCTTGACGCAGAGTCAGAGCGCGTGATACAACAAGCACTAGAAAAATTGATGCAGAATAGAACAACAGTTATGGTTGCTCATAGGCTATCCACAATAAGAAATGCATATCAAATCTCAGTTGTAAATGATGGAAAGATTGTTGAGCAAGGAACTCATTCAAGTCTAATAGAGAACAAGAGTGGAGCATATTATAAATTAGTTAGTCTTCAGCAGCAGAATGTACATGAAAACTGTATTTCTATGTTAATTTGA 918 0.3976 MKKEKEKAKNERKEEEEEEEEEEECAARRRRRCSEIVQYGSVLMEKELSSFKSVIKSFMVLIITALAMGETLAMAPDMLKGNQMAASVFEVMDRRTKFLQGRLCPSQGHSGRVMIDGKDIKNLNLKSVRKHIGFVQQEPVLFATSIYDNILYGKEGASDSEIVEAAKLANAHSFINGFPEGYSTKVGERGVQLSGGQKQRIAIARAILKNPAILLLDEATSALDAESERVIQQALEKLMQNRTTVMVAHRLSTIRNAYQISVVNDGKIVEQGTHSSLIENKSGAYYKLVSLQQQNVHENCISMLI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00139 305 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 38 99 - -
Adu09g00139 305 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 38 99 IPR039421 -
Adu09g00139 305 Gene3D - 109 293 IPR027417 -
Adu09g00139 305 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
Adu09g00139 305 Coils Coil 1 31 - -
Adu09g00139 305 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 109 296 - -
Adu09g00139 305 MobiDBLite consensus disorder prediction 1 27 - -
Adu09g00139 305 Pfam ABC transporter 108 221 IPR003439 GO:0005524
Adu09g00139 305 Gene3D ABC transporter type 1, transmembrane domain 18 100 IPR036640 GO:0005524|GO:0016021
Adu09g00139 305 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 109 296 IPR039421 -
Adu09g00139 305 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 290 IPR003439 GO:0005524
Adu09g00139 305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 292 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00139 Adu-Chr9 1347792 1349468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00139 37 97 Calmodulin-binding Proteins AT2G36910 44.262 4.08e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00139 K05658 - gmx:100809752 379.407