Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00101 ATGGATGATTTTTCATGGGAGCATTTGCATCTTCAATTGGAAATGGATGATGAGAATATGAACAATAATAATGGCGTTGATGATGATAATAATGAAGATGATGATGAGTTCTTAAGAGAAATCCTAATGTTGCAACCATCTTTCTCTTCTGAAAATAGTGAAAGTGATAATCTCCAAAACACCGTTGGATCATCATCATCACCGGTTATTGAAGAAGTGCCGCAAGATCTGACGGCTGAGAATTCAAACAACAAGAACAAGAAGAATAATACTATGAAACAACCTCGTAGATCATCATCATCATCATCATCACTACGTTGTTCTTCTCCGAGGAGATACATTTTGTCGTTTGATAACTCAACCATGACACCAGCTACACCAAATCAATTACAAGAAGACCCTTATTATGCAAACAATAATAATAATAATAATAATAATAATAATAATCATAAGAACAAGAAGAACAAAGATCCATCATCATGTGATTATTCTTCTCCAAAAAGGGTGGTGCCGATTTGTACTAATAATAGTGAGAATAAAAAGGAGGAAGGTGCAATAACAACAAAGAGGGCAAGAAGCTCTTCACAAACAATGGATCACATCATGGCAGAGAGAAAGAGGAGACAAGAACTCACTGAGAGGTTCATAGCACTCTCAGCTACCATCCCTGGCTTGACTAAGACAGACAAGGCATCAATACTTAGAGCAGCCATAGATTATGTGAAGCAACTTCAAGAGCAGGTGCAAGAATTAGAAAAGAAAAACAAGAAGAGGAGCAGAGAGTCAGTGATATTGGTGAAGAAATCGAAGAGCAATAATGAAAAAATATTATTAGAAGAAAGTACAATAATATCAAGTGAAACAAGAAGAAGTGAAGATGGTGGAACAGGGCTCCCTGATATTGAAGCAAGATTTATGGGGAAAGATGTTTTGATTGAGATTCATTGTGAGAAGGAGAATGGCATTGAGATGAAAATACTTAATCAGCTTGAAAATCTTCATCTTTTTGTCACTGGAAGTAGTGTTCTTCCTTTTGGCAATTCTGCTCTTGGGATCACTATTATTGCTAAGATGGGAGATTCGTGTGAAATGACAGTGAATGATGTGGTCAGAAACCTTAGGCAAGTGTTCTTGAAGGCACATCAAAATTCACATGGCATTTAA 1164 0.3634 MDDFSWEHLHLQLEMDDENMNNNNGVDDDNNEDDDEFLREILMLQPSFSSENSESDNLQNTVGSSSSPVIEEVPQDLTAENSNNKNKKNNTMKQPRRSSSSSSSLRCSSPRRYILSFDNSTMTPATPNQLQEDPYYANNNNNNNNNNNNHKNKKNKDPSSCDYSSPKRVVPICTNNSENKKEEGAITTKRARSSSQTMDHIMAERKRRQELTERFIALSATIPGLTKTDKASILRAAIDYVKQLQEQVQELEKKNKKRSRESVILVKKSKSNNEKILLEESTIISSETRRSEDGGTGLPDIEARFMGKDVLIEIHCEKENGIEMKILNQLENLHLFVTGSSVLPFGNSALGITIIAKMGDSCEMTVNDVVRNLRQVFLKAHQNSHGI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00101 387 MobiDBLite consensus disorder prediction 48 149 - -
Adu09g00101 387 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Adu09g00101 387 PANTHER BHLH TRANSCRIPTION FACTOR 5 382 - -
Adu09g00101 387 SMART finulus 201 250 IPR011598 GO:0046983
Adu09g00101 387 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 261 IPR036638 GO:0046983
Adu09g00101 387 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 5 382 - -
Adu09g00101 387 Gene3D - 193 268 IPR036638 GO:0046983
Adu09g00101 387 MobiDBLite consensus disorder prediction 48 168 - -
Adu09g00101 387 MobiDBLite consensus disorder prediction 180 199 - -
Adu09g00101 387 Pfam Helix-loop-helix DNA-binding domain 199 245 IPR011598 GO:0046983
Adu09g00101 387 Coils Coil 234 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00101 Adu-Chr9 857317 862399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00101 188 374 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 50.259 2.45e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu09g00101 HLH 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00101 - - ahf:112779544 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02564 07 79578882 79581107 Adu09g00101 09 857317 862399 PCT
Adu09g00101 09 857317 862399 Adu07g02565 07 79591109 79592273 PCT