Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00088 ATGGAAAGTCTTGAAGAAATCAAATCGGAGAACGTAGATCTTGAAAGCAAATTGCTGAAATTCTTGGGGTTTATGTGGAATCCTTTGTCATGGGTTATGGAAGCTGCTGCAGTAATGGCAATTGCAGTGGCCAATGGAGGGGGGAAACCACCAGATTGGCCAGATTTTGTTGGAATAATAGTTCTGCTTCTTATCAACTCCACCATTAGCTTCATAGAAGAAAATAATGCAGGTAATGCTGCTGCAGCACTAATGGCAGGTCTTGCTCCAAAAGCCAAGGTTTTAAGAGATGGAAAATGGAATGAGGAGGAAGCAGCTATATTAGTCCCTGGAGACATCATAAGCATAAAATTAGGAGACATAATTCCAGCAGATGCTCGTCTCTTAGAAGGGGACCCATTGAAGATTGATCAATCAGCACTGACTGGTGAATCATTGCCTGTAACAAAGAATCCAGGTGCTGAAGTCTACTCCGGGTCCACAGTAAAACAGGGAGAGATTGAAGCCATTGTCATTGCCACTGGAGTCCATACCTTCTTTGGTAAGGCTGCTCATTTGGTAGACAGCACTAACCAAGTTGGCCACTTCCAAAAGGTGTTGACAGCAATTGGAAACTTCTGCATTTGTTCAATTGCATTGGGAATGCTAGTAGAGATTATTGTTATGTATCCAATTCAACATAGACCTTACAGGAGTGGAATTGACAATCTCTTGGTGCTTCTCATTGGTGGCATTCCCATTGCCATGCCAACAGTCTTGTCAGTTACAATGGCTATTGGTTCCCATAGGTTGTCTGAACAAGGTGCCATCACTAAGAGGATGACAGCCATTGAAGAAATGGCTGGAATGGATGTTCTATGCAGTGACAAGACTGGCACCTTAACACTCAACAAGCTCACTGTCGACAAAAATTTGATCGAGACTTTTGCAAAAGATGTGGACAAAGACACTGTACTTTTGCTTGGAGCTAGAGCATCAAGGGTAGAGAACCAAGATGCTATCGATGCTTGCATTGTTGGAATGTTAGGTGATCCAAAAGAGGCAAGAGATGGCATTACAGAGGTTCATTTCTTGCCCTTCAATCCAGTGGACAAGCGCACGGCCATAACATACATCGATGCCGACGGTAACTGGCACCGAGTAAGCAAAGGTGCGCCGGAGCAGATTATATCTCTTTGTAATCTAAGGGGAGATGTGAAGAACAAAGCTCATTCCATCATTGATGGTTTTGCTGACAGAGGCCTCCGTTCACTTGCTATTGCTAGACAAGAAGTGCCAGAGAAGACCAAAGAGAGTGCAGGAGGCCCATGGCAATTCGTAGGCCTCCTGCCTCTCTTTGATCCGCCTAGGCACGACAGTGCGGATACCATCCACACGGCTCTTCAACTCGGAGTCAATGTCAAGATGATCACAGGTGATCAGCTAGCTATTGGCAAGGAGACGGCTCGCCGCCTCGGCATGGGAAGTAATATGTACCCTTCTTCCTCCCTCCTTGGCAATGACCAGGATGGTACCTTTGGTGGAATTCCGGTTGATGATCTTATCGAGCAAGCTGACGGCTTTGCCGGTGTCTTCCCAGAGCATAAATATGAAATTGTAAGGAGACTTCAAGAAAGGAAGCACATATGTGGAATGACCGGAGACGGTGTCAACGATGCACCGGCACTTAAGAAGGCAGACATCGGAATTGCAGTGGCGGATGCCACCGACGCGGCGCAAAGCGCGTCGGACATAGTCTTGACAGAGCCTGGTTTAAGCGTGATTGTAAGCGCAGTCTTGACAAGCCGGTCTATTTTCCAGAGGATGAAGAACTACACAATTTATGCTGTTTCCATAACAATTCGGATTGTCTTGGGATTCATGCTTCTTGCTCTTATTTGGAAGTTTGATTTCTCACCCTTCATGGTTTTGGTCATTGCCATACTCAATGATGGAACTATCATGACCATTTCCAAGGATAGGGTGAAACCATCTCCTACTCCAGATTCATGGAAGCTAAATGAGATTTTCACAACCGGCATTGTTCTTGGAACCTACCTCGCCGTCACCACAGTCTTCTTCTTTTGGGCTATCTATGCAACCGATTTCGTCTCGAACCATTTCGGCGTAAAATCGATCCGAGGTAGCGAAACAGAGCTCACATCAGCTGTTTATCTTCAAGTGAGTATTATAAGTCAGGCTCTCATCTTTGTTACCAGATCAAGGAACTGGTCTTATGTTGAAAGGCCTGGCTTGTTGCTTCTCACAGCATTTATCATAGCACAATTGGTTGCAACATTGTTGGCTGTGTATGCAAACCTTGGCTTTGCAAAAATCAAAGGAATTGGATGGGGCTGGGCTGGTGTCATTTGGCTCTACAGTCTCATTATTTATATCCCATTGGATATTCTTAAATTCATCATCCGTTATTCCTTAAGTGGCAAGGCATGGAACAATATTACTGAAAATAGGGTTGCTTTCTCATCAAAGAAAGGTTATGGAAAGGAAGAGCGCGAAGCGCAATGGGCTCGTGAAGAACGCACCAGACATAACCTAAATCCACCTGAAGCTGCAGATATATTGAACACAGGAAATGATTATAGGGAATTGACTGAAATCGCAGAACAAGCTAAAAAACGTGCCGAAATTGCAAGATTAAGGGAGCTTCACACATTGAAGGGGCATGTTGAGTCTGTTGTAAGGCTCAAGGGACTTGACATTGAGACAATGAATCAAAATTACACTGTTTGA 2730 0.4462 MESLEEIKSENVDLESKLLKFLGFMWNPLSWVMEAAAVMAIAVANGGGKPPDWPDFVGIIVLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWNEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGAEVYSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIALGMLVEIIVMYPIQHRPYRSGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIETFAKDVDKDTVLLLGARASRVENQDAIDACIVGMLGDPKEARDGITEVHFLPFNPVDKRTAITYIDADGNWHRVSKGAPEQIISLCNLRGDVKNKAHSIIDGFADRGLRSLAIARQEVPEKTKESAGGPWQFVGLLPLFDPPRHDSADTIHTALQLGVNVKMITGDQLAIGKETARRLGMGSNMYPSSSLLGNDQDGTFGGIPVDDLIEQADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAQSASDIVLTEPGLSVIVSAVLTSRSIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFSPFMVLVIAILNDGTIMTISKDRVKPSPTPDSWKLNEIFTTGIVLGTYLAVTTVFFFWAIYATDFVSNHFGVKSIRGSETELTSAVYLQVSIISQALIFVTRSRNWSYVERPGLLLLTAFIIAQLVATLLAVYANLGFAKIKGIGWGWAGVIWLYSLIIYIPLDILKFIIRYSLSGKAWNNITENRVAFSSKKGYGKEEREAQWAREERTRHNLNPPEAADILNTGNDYRELTEIAEQAKKRAEIARLRELHTLKGHVESVVRLKGLDIETMNQNYTV 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00088 909 SFLD p-type atpase 269 597 IPR044492 -
Adu09g00088 909 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 805 IPR023298 -
Adu09g00088 909 SUPERFAMILY HAD-like 283 593 IPR036412 -
Adu09g00088 909 SUPERFAMILY Calcium ATPase, transduction domain A 90 187 IPR008250 -
Adu09g00088 909 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 521 631 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu09g00088 909 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 59 312 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu09g00088 909 Gene3D - 284 583 IPR023214 -
Adu09g00088 909 PRINTS H+-transporting ATPase (proton pump) signature 718 739 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu09g00088 909 PRINTS H+-transporting ATPase (proton pump) signature 577 602 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu09g00088 909 PRINTS H+-transporting ATPase (proton pump) signature 518 534 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu09g00088 909 PRINTS H+-transporting ATPase (proton pump) signature 546 562 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu09g00088 909 PRINTS H+-transporting ATPase (proton pump) signature 403 421 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu09g00088 909 SFLD C1.7: P-type atpase like 269 597 - -
Adu09g00088 909 Gene3D - 90 174 - -
Adu09g00088 909 Gene3D - 858 909 - -
Adu09g00088 909 Coils Coil 860 880 - -
Adu09g00088 909 Gene3D - 52 773 - -
Adu09g00088 909 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 15 764 IPR006534 GO:0008553|GO:0016021|GO:0120029
Adu09g00088 909 CDD P-type_ATPase_H 6 799 IPR006534 GO:0008553|GO:0016021|GO:0120029
Adu09g00088 909 ProSitePatterns E1-E2 ATPases phosphorylation site. 289 295 IPR018303 -
Adu09g00088 909 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 13 890 - -
Adu09g00088 909 PANTHER CALCIUM-TRANSPORTING ATPASE 13 890 - -
Adu09g00088 909 Pfam haloacid dehalogenase-like hydrolase 283 560 - -
Adu09g00088 909 PRINTS P-type cation-transporting ATPase superfamily signature 441 452 - -
Adu09g00088 909 PRINTS P-type cation-transporting ATPase superfamily signature 137 151 - -
Adu09g00088 909 PRINTS P-type cation-transporting ATPase superfamily signature 287 301 - -
Adu09g00088 909 PRINTS P-type cation-transporting ATPase superfamily signature 463 473 - -
Adu09g00088 909 PRINTS P-type cation-transporting ATPase superfamily signature 546 565 - -
Adu09g00088 909 PRINTS P-type cation-transporting ATPase superfamily signature 569 581 - -
Adu09g00088 909 Gene3D - 299 446 IPR023299 GO:0000166
Adu09g00088 909 Pfam E1-E2 ATPase 89 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00088 Adu-Chr9 783353 788794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00088 4 909 Primary Pumps ATPases AT3G42640 81.457 0.0 1506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00088 K01535 - gmx:100796240 1507.27