Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu09g00080 | ATGGACCTTCAAACCTTGGAGAATTTGAAAAAATCTTCATCAAAGAACAAAGATCAAGATGATGATCAAGAAGTGAAAGAGAATACTACTAGTACTGTTCTTCAACTTGATCTAAGTCTTTCAAGCAATGATGAATCAAGAACAAAGCAAGAGCTGAACCTTCTCAACTTCCTTGATCCAAATTCATCAGAAAACTCATCAGATTCAACTCAAGAAGAAGAAGAAGGTAACAAGAACAAGAATCATGAAATGGAGCACAGAACATTCTCATGCAACTATTGCCAGAGAAAGTTTTACAGTTCTCAAGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGAACATTAGCAAGAAGAGGACACCACAAATCTCCATCATCATCATCATCATCAATGGTAGATTTTGGATACAGATTCTCTCCTTCTTTTTCTTCTTCTTCTTCTTCAAATGGATCCTATAACAAGCCACTTGGGATCCAGCTTCATTCTATGATCAATAAACCTTCTTCTCAGCCACCCTTTTTCGCGATGACCTGTCGCGAAAACGGGTGGCAGAGACAGAAGCTTTATTTGGATTCACACCCTGCAAATCGGAAGCTGAATAGTAATAATGGTTTGGAATCTGAATCACCATCATCCATGGCTGTTTTCGACGGCAGCGGCGGCGTGCCGAGGTTAGGGAAGTTTCATCCTACAAAGCTTGTGACACAAGGTTTTGGAGGATATTGGTTTGGTAGTGTTTCTCATTTGAATTCTAAACATGAAAATAAGTTGCAGAAGCTTGATTTGTCACTCAAGCTCTAA | 807 | 0.3928 | MDLQTLENLKKSSSKNKDQDDDQEVKENTTSTVLQLDLSLSSNDESRTKQELNLLNFLDPNSSENSSDSTQEEEEGNKNKNHEMEHRTFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGHHKSPSSSSSSMVDFGYRFSPSFSSSSSSNGSYNKPLGIQLHSMINKPSSQPPFFAMTCRENGWQRQKLYLDSHPANRKLNSNNGLESESPSSMAVFDGSGGVPRLGKFHPTKLVTQGFGGYWFGSVSHLNSKHENKLQKLDLSLKL | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu09g00080 | 268 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 16 | 268 | IPR044246 | GO:0009788 | |
Adu09g00080 | 268 | MobiDBLite | consensus disorder prediction | 103 | 133 | - | - | |
Adu09g00080 | 268 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
Adu09g00080 | 268 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 89 | 116 | IPR013087 | - | |
Adu09g00080 | 268 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 16 | 268 | - | - | |
Adu09g00080 | 268 | SUPERFAMILY | beta-beta-alpha zinc fingers | 86 | 116 | IPR036236 | - | |
Adu09g00080 | 268 | MobiDBLite | consensus disorder prediction | 28 | 67 | - | - | |
Adu09g00080 | 268 | MobiDBLite | consensus disorder prediction | 11 | 27 | - | - | |
Adu09g00080 | 268 | Gene3D | Classic Zinc Finger | 62 | 140 | - | - | |
Adu09g00080 | 268 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 91 | 111 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu09g00080 | Adu-Chr9 | 725756 | 726902 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu09g00080 | 19 | 268 | C2H2 Transcription Factor Family | AT5G10970 | 38.113 | 4.64e-29 | 109 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Adu09g00080 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu09g00080 | - | - | adu:107463735 | 492.656 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu09g00080 | 09 | 725756 | 726902 | Adu09g00080 | 09 | 725756 | 726902 | ECH |