Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00080 ATGGACCTTCAAACCTTGGAGAATTTGAAAAAATCTTCATCAAAGAACAAAGATCAAGATGATGATCAAGAAGTGAAAGAGAATACTACTAGTACTGTTCTTCAACTTGATCTAAGTCTTTCAAGCAATGATGAATCAAGAACAAAGCAAGAGCTGAACCTTCTCAACTTCCTTGATCCAAATTCATCAGAAAACTCATCAGATTCAACTCAAGAAGAAGAAGAAGGTAACAAGAACAAGAATCATGAAATGGAGCACAGAACATTCTCATGCAACTATTGCCAGAGAAAGTTTTACAGTTCTCAAGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGAACATTAGCAAGAAGAGGACACCACAAATCTCCATCATCATCATCATCATCAATGGTAGATTTTGGATACAGATTCTCTCCTTCTTTTTCTTCTTCTTCTTCTTCAAATGGATCCTATAACAAGCCACTTGGGATCCAGCTTCATTCTATGATCAATAAACCTTCTTCTCAGCCACCCTTTTTCGCGATGACCTGTCGCGAAAACGGGTGGCAGAGACAGAAGCTTTATTTGGATTCACACCCTGCAAATCGGAAGCTGAATAGTAATAATGGTTTGGAATCTGAATCACCATCATCCATGGCTGTTTTCGACGGCAGCGGCGGCGTGCCGAGGTTAGGGAAGTTTCATCCTACAAAGCTTGTGACACAAGGTTTTGGAGGATATTGGTTTGGTAGTGTTTCTCATTTGAATTCTAAACATGAAAATAAGTTGCAGAAGCTTGATTTGTCACTCAAGCTCTAA 807 0.3928 MDLQTLENLKKSSSKNKDQDDDQEVKENTTSTVLQLDLSLSSNDESRTKQELNLLNFLDPNSSENSSDSTQEEEEGNKNKNHEMEHRTFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGHHKSPSSSSSSMVDFGYRFSPSFSSSSSSNGSYNKPLGIQLHSMINKPSSQPPFFAMTCRENGWQRQKLYLDSHPANRKLNSNNGLESESPSSMAVFDGSGGVPRLGKFHPTKLVTQGFGGYWFGSVSHLNSKHENKLQKLDLSLKL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00080 268 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 268 IPR044246 GO:0009788
Adu09g00080 268 MobiDBLite consensus disorder prediction 103 133 - -
Adu09g00080 268 MobiDBLite consensus disorder prediction 1 84 - -
Adu09g00080 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Adu09g00080 268 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 16 268 - -
Adu09g00080 268 SUPERFAMILY beta-beta-alpha zinc fingers 86 116 IPR036236 -
Adu09g00080 268 MobiDBLite consensus disorder prediction 28 67 - -
Adu09g00080 268 MobiDBLite consensus disorder prediction 11 27 - -
Adu09g00080 268 Gene3D Classic Zinc Finger 62 140 - -
Adu09g00080 268 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00080 Adu-Chr9 725756 726902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00080 19 268 C2H2 Transcription Factor Family AT5G10970 38.113 4.64e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu09g00080 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00080 - - adu:107463735 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00080 09 725756 726902 Adu09g00080 09 725756 726902 ECH