Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00071 ATGGATATTATGACTGCCTTACAGCTTGTGCTCAGGAAGTCACTTGCTTATGGTGGTCTTGCACGTGGCCTTCATGAGGGTGCCAAGGTTATTGAGAAGCGCACCGCACAGCTTGTTGTTCTCGCAGAGGACTGCGACCAACCTGACTATGTCAAACTTGTCAAGGCCCTTTGTGCTGAGCACAATGTTAGCCTGCTGACAGTTCCAAGTGCAAAGACCCTTGGAGAGTGGGCTGGTTTGTGCAAGATTGATTCAGAAGGAAAAGCCAGGAAGGTGACTGGCTGCTCTTGTGTTGTTGTGAAGGACTTTGGCGAGGAACATGAAGCTTATAACGTTGTCCTTCAGCATGTGAAAGCTCAATGA 363 0.4876 MDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKRTAQLVVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKAQ 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00071 120 Gene3D - 1 120 IPR029064 -
Adu09g00071 120 ProSitePatterns Ribosomal protein S12e signature. 6 24 IPR000530 GO:0003735|GO:0005840|GO:0006412
Adu09g00071 120 PRINTS Ribosomal protein S12E family signature 10 23 IPR000530 GO:0003735|GO:0005840|GO:0006412
Adu09g00071 120 PRINTS Ribosomal protein S12E family signature 65 86 IPR000530 GO:0003735|GO:0005840|GO:0006412
Adu09g00071 120 PRINTS Ribosomal protein S12E family signature 90 103 IPR000530 GO:0003735|GO:0005840|GO:0006412
Adu09g00071 120 PRINTS Ribosomal protein S12E family signature 24 40 IPR000530 GO:0003735|GO:0005840|GO:0006412
Adu09g00071 120 SUPERFAMILY L30e-like 2 118 IPR029064 -
Adu09g00071 120 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 99 IPR004038 -
Adu09g00071 120 PANTHER 40S RIBOSOMAL PROTEIN S12 1 120 - -
Adu09g00071 120 PANTHER 40S RIBOSOMAL PROTEIN S12 1 120 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00071 Adu-Chr9 659728 661564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00071 1 120 Cytoplasmic Ribosomal Protein Gene Family AT1G15930 77.500 4.82e-66 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00071 K02951 - gmx:100499723 233.802