Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00058 ATGTTCATTGAGAATCATATCCTCACTAAAAAAGCCAAGACTATTAACCTTAAAAATTCTGAGCATGCAGGAAATGGGATACTAAACTTCCTGTATATTGGAGGCCAGAGGGAGAAGTTTGTAAGGTTGGATGATCTTGATTCTAACATGTCATTCTCAGGCAGACCGAGTTTGATGGATAGGCTAAGATCGATCTTCCATGTTGGCGGCCGCGCAAGGAAGAATCCGTCACAATCCTTTAGGCTAGGAGTGAAGAAAGGATCAGCAGGACTCAGAACATTTGGAAGGTCACTGAAAACAGGTGTAACTACTTGGGCAGTGTTCCCTGAAGATCTCAAAGTTTCAGAGAAGAAAGTGTTTGATCCTCAAGACAAGCACCTTCTCCATTGGAACAAGTTCTTTGAGATCCTCTGCATTTTTTCAGTAGCTGTTGACCCTTTCTTCTTCTATCTCCCTTACTTCAACGTCAAGTCATTCTGCCTCGCCATAGATAGCACGCTGGCGAATTTTACAGCAGCATTGAGGACTGTATTGGATTTTATCTATCTCCTGCGCATAAGCTTTCAGTTCCGAACTGCTTATATCGCGCCTTCATCTCGTGTGTTTGGAAGAGGTGAACTTGTCATAGATCCTGCAAAGATTGCCAGTCGATATTTACAGCGATATTTCATTATCGACTTCATGTCTGTGTTTCCTGTGCCACAGATTATAGTGTGGAAATATCTATACAAAACAAGACATTCAGAGGTATTGAGTACGAAAACGGCACTGTTGAGAACTGTGATCCTGCAATATTTTCCAAGATTTCTAAGGTTTCTTCCATTAGCATCGGAAGTTAAAAAGACAGCTGGTGTTTTTGCAGAAAATGCACTGCTTGGAGCCATTTACTATTTGATTTGGTTTATGCTAGCTAGTCATATAACTGGCTCCGTTTGGTACTTACTTGCCATAGAACGCAATGACACATGTTGGAACAATGTTTGTCTTGAAGATAATAGATGTAATAGTCATTTCTTGTATTGTGGAAGTACCAATAAGCACATCCCAGGGTTTGATGCTTGGAAAAATGTCAGTGAGGATGTTCTTGTAAAGAAGTGCTTTGTTGATGGTGAGTTCAATTATGGAATCTTTGCTCAAGCAATCAAGAGTGGTATTGTTGCTTCTGTTGAAGTGTTTCCTAAGTTCTGTTACTGTTTATGGTGGGGCCTTCAAAATCTGAGTACAATTGGCCAAGGGCTTTCAACCAGCACCTACAGTAAAGAGGTGTGGTTTTCCATAGCAATAGCTGTTATGGGGCTCATCCTTTTCGCACTTCTGATTGGAAACATGCAGACATACCTTGACTCAATGTCGGTTCATCTTGACGAAATGAGGATCCAAAGACAGAGCTTGATGAAGAGCCTTCCAAAAGATTTAAGGAGAGACATCAAACGGCATCTTTGTTTGAATCTGGTTAAAAGGGTTCCACTCTTTGCTAACATGGAGGAACGCCTGCTCGATGCTATATGCGAGCGACTGAAACCTACTCTGTACACAGAGGGCACTGACATAGTTAGGGAAGGAGACCCTGTCAACGAGATGCTCTTCATCATCCGTGGACGCCTAGAGAGTGTCACCACAGATGGTGGAAGGAGTGGATTCTTTAACAGAGGGCTTCTCAAAGAAGGAGACTTCTGTGGTGAGGAGCTACTAACATGGGCACTAGATCCAAAAGCTGCAGCAAACTTGCCATCATCTACTAGGACAGTGAAGGCCATAAATGAGGTCGAGGCATTCGCATTGGAAGCCGAGGAGCTTAAGTTTGTCGCTTCGCAGTTTAGATACATTCATAGTAGGCAGGTTCAGCATACCTTCAGATTCTACTCACAGCAATGGAGGACATGGGCCGCAATCTACATTCAAGCCGCGTGGAGGAGGTATATGAGGAGGAAATACACCATGCAAAGAAGGCAGGAGGAAGAGTATTATTATGATTCTGATGACAGTGGTGGTGATTCTGCAAAGGCCTTGGTTAAACGTTCCTCAAGTTCATCTAGCTTTGCCACAACCATGTATGCTTCACGCTTTGCCGGGAATGTACTTCACGGTCATAGGCTTCGTGAAGCAGGTAGTTCCACTAGTCTAGGAAGAATTCAAAAACCATCTGAACCTGACTTCAGTCATTATGGTCCAAAGTGA 2178 0.4302 MFIENHILTKKAKTINLKNSEHAGNGILNFLYIGGQREKFVRLDDLDSNMSFSGRPSLMDRLRSIFHVGGRARKNPSQSFRLGVKKGSAGLRTFGRSLKTGVTTWAVFPEDLKVSEKKVFDPQDKHLLHWNKFFEILCIFSVAVDPFFFYLPYFNVKSFCLAIDSTLANFTAALRTVLDFIYLLRISFQFRTAYIAPSSRVFGRGELVIDPAKIASRYLQRYFIIDFMSVFPVPQIIVWKYLYKTRHSEVLSTKTALLRTVILQYFPRFLRFLPLASEVKKTAGVFAENALLGAIYYLIWFMLASHITGSVWYLLAIERNDTCWNNVCLEDNRCNSHFLYCGSTNKHIPGFDAWKNVSEDVLVKKCFVDGEFNYGIFAQAIKSGIVASVEVFPKFCYCLWWGLQNLSTIGQGLSTSTYSKEVWFSIAIAVMGLILFALLIGNMQTYLDSMSVHLDEMRIQRQSLMKSLPKDLRRDIKRHLCLNLVKRVPLFANMEERLLDAICERLKPTLYTEGTDIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAAANLPSSTRTVKAINEVEAFALEAEELKFVASQFRYIHSRQVQHTFRFYSQQWRTWAAIYIQAAWRRYMRRKYTMQRRQEEEYYYDSDDSGGDSAKALVKRSSSSSSFATTMYASRFAGNVLHGHRLREAGSSTSLGRIQKPSEPDFSHYGPK 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00058 725 Gene3D Jelly Rolls 488 608 IPR014710 -
Adu09g00058 725 SMART cnmp_10 490 621 IPR000595 -
Adu09g00058 725 ProSiteProfiles IQ motif profile. 626 654 IPR000048 GO:0005515
Adu09g00058 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 463 722 - -
Adu09g00058 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 34 462 - -
Adu09g00058 725 Pfam Cyclic nucleotide-binding domain 511 600 IPR000595 -
Adu09g00058 725 ProSiteProfiles cAMP/cGMP binding motif profile. 490 573 IPR000595 -
Adu09g00058 725 SUPERFAMILY cAMP-binding domain-like 478 607 IPR018490 -
Adu09g00058 725 Pfam Ion transport protein 130 452 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu09g00058 725 MobiDBLite consensus disorder prediction 703 725 - -
Adu09g00058 725 CDD CAP_ED 490 621 IPR000595 -
Adu09g00058 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 34 462 - -
Adu09g00058 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 463 722 - -
Adu09g00058 725 Gene3D - 131 450 - -
Adu09g00058 725 SUPERFAMILY Voltage-gated potassium channels 122 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00058 Adu-Chr9 479053 485924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00058 32 719 Ion Channels AT1G15990 62.280 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00058 K05391 - gmx:100810453 1045.03