Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00042 ATGGACAAGTACGAGAAGTTGGAGAAGGTTGGGGAAGGAACATATGGCAAAGTCTACAAGGCAAAAGAGAAGGCCACTGGACAAATTGTTGCATTGAAGAAGACACGGTTGGAGATGGATGAGGAAGGCGTCCCTCCGACCGCCCTTAGGGAGGTCTCCCTCCTTCAAATGCTGTCTCAGTCTATCTACATTGTCCGCCTTTTATCCGTGGAGCATGTCGACAAGGTCCCTAAATCGGCCCCGGCCTCGGCCACTACCAAGCCCCTACTCTACCTTGTCTTTGAGTACCTTGACACTGACCTCAAGAAGTTCATTGATTCGCACCGCAAGGGCTCGAACCCAAGGCCACTCCCTCCTGCCCTAATCCAGAGTTTCCTTTTCCAGCTATGCAAGGGTGTTGCACATTGCCATAGTCATGGTGTCCTTCACCGTGACCTCAAGCCTCAGAACCTCCTCCTTGACCAGAAAAAAGGGATTCTCAAGATTGCTGATCTTGGACTTGGACGAGCCTTCACTGTCCCTCTCAAGAGTTACACTCATGAGATTGTCACCCTTTGGTATAGAGCTCCTGAGGTCTTGCTTGGAACCACCCATTACTCCACTGGGGTTGATATGTGGTCTGTTGGGTGCATCTTTGCTGAAATGGTGAGAAGGCAAGCTCTGTTTCCAGGGGATTCTGAGTTCCAACAGCTTCTTAACATATTCAAGATTTTGGGAACTCCAACTGAGGAGCAATGGCCAGGAGTTACTTCGCTTCGTGATTGGCATACCTACCCAAAGTGGGAACCTCAGAACTTGGCGAGGACTGTGCCAACTTTGGGACCTGATGGAGTGGACCTTCTCACGAAAATGCTCAAGTATAATCCCGCTGAGAGAATCTCTGCCAAGGCAGCACTTGATCATCCTTACTTTGACAGTCTTGACAAGTCTCAGTTTTAA 939 0.4952 MDKYEKLEKVGEGTYGKVYKAKEKATGQIVALKKTRLEMDEEGVPPTALREVSLLQMLSQSIYIVRLLSVEHVDKVPKSAPASATTKPLLYLVFEYLDTDLKKFIDSHRKGSNPRPLPPALIQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQKKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGTTHYSTGVDMWSVGCIFAEMVRRQALFPGDSEFQQLLNIFKILGTPTEEQWPGVTSLRDWHTYPKWEPQNLARTVPTLGPDGVDLLTKMLKYNPAERISAKAALDHPYFDSLDKSQF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00042 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Adu09g00042 312 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Adu09g00042 312 PANTHER CYCLIN-DEPENDENT KINASE B1-2 1 312 - -
Adu09g00042 312 ProSiteProfiles Protein kinase domain profile. 4 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g00042 312 Pfam Protein kinase domain 4 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g00042 312 Gene3D Transferase(Phosphotransferase) domain 1 100 311 - -
Adu09g00042 312 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Adu09g00042 312 SMART serkin_6 4 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g00042 312 SUPERFAMILY Protein kinase-like (PK-like) 1 307 IPR011009 -
Adu09g00042 312 PANTHER CELL DIVISION PROTEIN KINASE 1 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00042 Adu-Chr9 344745 346449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00042 1 312 Core Cell Cycle Gene Families AT3G54180 83.333 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Adu09g00042 Pkinase 4.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00042 K07760 - gmx:100805119 585.104