Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00025 ATGACCAACGGCCACATAACCGTAACCGTCGACACCAGGCATTCTGACGCCACCGAACAGCGACGCATTCCTCCTCCTCCTGCTGCTGCTGCTGCTGCTTCCGCTGCCGTCAATCTCGACTATGACGACGACGACCACAACGACGACGACGATGTTGCAGATCCAAATGATCCTTTCGATATTCAACACACCAAGCATGCGCCCATCGAGACCCTCCGCCGTTGGAGACAAGCAGCACTCGTGCTCAATGCATCAAGGCGCTTTAGATATACCTTGGACCTAAAAAAGGAAGAGGAGAGACAGCAAAAGAAAAGCTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCATTGCTTTTCAGATTGGCTGGTGAACGTGAATTAGTGGTAACAGCACCGACACCTGCACATACAGTTGGTGACTTTGGAATTGGGCTCGAACAACTTTCTTCAGTTTCTAAGGAGCAGAACACTGCTGCTTTAGAAGAATATGGAGGGGTCAAGGGCTTATCAAATTTATTAAGGTCAAATCTCGATAAAGGAATTAGTGGAGATGATGCTGATTTACTAAAAAGGAAAAATGCTTATGGAACTAACACATATCCTCGGAAAAAAGGAAGAAGCTTCTGGAGGTTTTTATGGGAAGCATGGCAAGATCTAACTCTTATAATATTGATTATAGCAGCAGTTGTCTCATTGGTGCTTGGAATAAAAACAGAGGGTTTGAGTGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCGGTTTTTCTGGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTAAGAATTTGAATGCAGAGAAACAAAATATACAGTTGGAGGTCATGAGAGGTGGCAGAACAGTTAAATTGTCGATATTTGACATTGTTGTTGTATTAATCACGGGTCATTCACTTGCCGTTGATGAATCCAGTATGACGGGTGAAAGCAAAATTGTTCACAAGGATCACAAATCACCCTTTTTGATGTCTGGTTGCAAAGTGGCTGATGGAGTTGGAGTTATGCTGGTAACTGGTGTTGGTATAAATACAGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGATAATGGAGAAGAGACTCCATTGCAGGTACGTTTGAATGGAGTAGCAACTTTTATTGGTGTAGTTGGGCTTTCTGTGGCTGTTTTAGTGCTAGCAGTCCTCTTGGGCAGATACTTTTCTGGCCATTCTACTGATGATGATGGAAACGTGGAATTTGTTGCTGGAAAAACTAAAGCAAGTACTGCAGTTGATGGCGTCATCAAAATTTTCACCATTGCAGTTACCATTGTGGTTGTCGCAGTGCCTGAAGGTCTACCTTTGGCTGTTACCTTAACCCTGGCATACTCAATGCGGAAAATGATGAGAGACAAAGCCCTGGTTCGGAGGCTGTCAGCCTGCGAAACTATGGGATCTGCGACAACAATATGCAGTGATAAGACAGGAACATTGACCTTAAATCAGGCAAGATCCATATATAAATCCCTGATTGAGGCATATGTTGGAAGGAACAAATTAAATCCACCAGATGACTCATCAAAGTTAAATCCGGAAGTTTTATCCTTGATAAACGAGGGCATTGCCCAGAATACTACTGGAAATGTTTTTGTGCCTAAGGAAGGAGGAGAGGCAGAGATTTCAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTAAAGTTGGGTATGAATTTTAGTCTTCTCAGATCAAATACGACAGTTCTCCATGTCTTCCCCTTTAATTCCGAGAAAAAAAGAGGCGGTGTTGCTGTGAAGCTGGAGGGCTCTGGAGTACATATACATTGGAAAGGAGCTGCAGAAATACTTCTTGGAGCATGTACGCAATATCTTGATTCAGATGGTCATTTGCAATCCATTGAGGGAGAGCAGGTAGCTTTCAAGGAGGCGATTGATAACATGGCTGCTCGCAGCTTGCGTTGTGTTGCCATTGCTTACAGATCATATGAATTAGACAAAGTTCCATCTAATGAAGATGATTTGGAGCAATGGTCGTTACCAGAAAATGATCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGTGTCAAAGAAGCAGTGGAACTATGCACTAAAGCTGGTGTCAAGGTACGCATGGTTACCGGAGACAACCTTCAAACAGCAAGGGCAATAGCTTTGGAGTGTGGGATACTTACTTCAAATGAGGAAGCTGTTGAACCAGTTATAATTGAAGGGAAGAAATTCCGTGCACTAAGCGAAAAAGAAAGGGAACAGATTGCTAAGAAAATAGCGGTCATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCTCTACGTAAAGGAGGTGAAGTTGTTGCCGTCACAGGAGATGGAACCAATGATGCCCCTGCACTTCACGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTGGATGATAACTTTGCGTCAGTAGTAAAGGTTGTCCGGTGGGGACGTTCTGTTTATGCAAATATTCAGAAATTCATCCAATTCCAGCTTACTGTTAATGTTGCTGCTCTTGTAATTAATGTTGTTGCAGCAATATCCTCTGGTGATGTTCCTTTGAATGCAGTACAGCTTCTGTGGGTCAACCTTATCATGGACACACTTGGGGCGCTTGCACTGGCCACTGAACCACCAGCGGACAGCCTTATGCGCAGAGCACCTGTTGGGCGAAGGGAACCTCTTATAACGAATGTCATGTGGAGAAACTTGGTTGTACAGGCTGTCTATCAAGTTACTGTTCTTCTTGTTCTGAACTTTGCTGGTGAAAGTTTCATACCTAAGCAAGAAACTAAATCCCTTGACAGTCAAACCAAGAACACGTTAATATTCAATGCATTCGTCCTGTGCCAAATATTCAACGAGTTCAATGCTCGGAAACCAGAAGGAATGAATGTATTCCAAGGGGTGACTAAGAACCGTCTATTCATGGGAATTGTTGGAATGACCTTTATCCTTCAGATAATTATCATCGAGTTCCTTGGAAAGTTCACCAAAACAGTGAAACTTGATTGGAAGCTGTGGATTGCTTCTCTTGTTATTGGCATTGTCAGCTGGCCTCTTGCTGTTGCCGGAAAACTCATTCCGGTTCCCAAAACACCATTGTCACGCTGCTTAGCCAAGCCACTTAGAAGATGGAGAAGGTCTCGCGCACAAAGTCAACTGAACACCCCCAGCATTAATTTTTCACGTTAA 3303 0.436 MTNGHITVTVDTRHSDATEQRRIPPPPAAAAAASAAVNLDYDDDDHNDDDDVADPNDPFDIQHTKHAPIETLRRWRQAALVLNASRRFRYTLDLKKEEERQQKKSLIRAHAQVIRAALLFRLAGERELVVTAPTPAHTVGDFGIGLEQLSSVSKEQNTAALEEYGGVKGLSNLLRSNLDKGISGDDADLLKRKNAYGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAVVSLVLGIKTEGLSEGWYDGGSIAFAVFLVIVVTAVSDYRQSLQFKNLNAEKQNIQLEVMRGGRTVKLSIFDIVVVLITGHSLAVDESSMTGESKIVHKDHKSPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGVVGLSVAVLVLAVLLGRYFSGHSTDDDGNVEFVAGKTKASTAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQARSIYKSLIEAYVGRNKLNPPDDSSKLNPEVLSLINEGIAQNTTGNVFVPKEGGEAEISGSPTEKAILSWAVKLGMNFSLLRSNTTVLHVFPFNSEKKRGGVAVKLEGSGVHIHWKGAAEILLGACTQYLDSDGHLQSIEGEQVAFKEAIDNMAARSLRCVAIAYRSYELDKVPSNEDDLEQWSLPENDLVLLAIVGIKDPCRPGVKEAVELCTKAGVKVRMVTGDNLQTARAIALECGILTSNEEAVEPVIIEGKKFRALSEKEREQIAKKIAVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPADSLMRRAPVGRREPLITNVMWRNLVVQAVYQVTVLLVLNFAGESFIPKQETKSLDSQTKNTLIFNAFVLCQIFNEFNARKPEGMNVFQGVTKNRLFMGIVGMTFILQIIIIEFLGKFTKTVKLDWKLWIASLVIGIVSWPLAVAGKLIPVPKTPLSRCLAKPLRRWRRSRAQSQLNTPSINFSR 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00025 1100 Gene3D - 68 121 - -
Adu09g00025 1100 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 769 883 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu09g00025 1100 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 431 503 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu09g00025 1100 Pfam Ca2+-ATPase N terminal autoinhibitory domain 56 99 IPR024750 GO:0005516
Adu09g00025 1100 SUPERFAMILY Calcium ATPase, transmembrane domain M 164 1066 IPR023298 -
Adu09g00025 1100 Pfam Cation transporter/ATPase, N-terminus 164 232 IPR004014 -
Adu09g00025 1100 Pfam haloacid dehalogenase-like hydrolase 488 817 - -
Adu09g00025 1100 ProSitePatterns E1-E2 ATPases phosphorylation site. 493 499 IPR018303 -
Adu09g00025 1100 SFLD p-type atpase 473 855 IPR044492 -
Adu09g00025 1100 SUPERFAMILY Calcium ATPase, transduction domain A 285 364 IPR008250 -
Adu09g00025 1100 SMART Cation_ATPase_N_a_2 166 237 IPR004014 -
Adu09g00025 1100 PRINTS P-type cation-transporting ATPase superfamily signature 696 707 - -
Adu09g00025 1100 PRINTS P-type cation-transporting ATPase superfamily signature 718 728 - -
Adu09g00025 1100 PRINTS P-type cation-transporting ATPase superfamily signature 491 505 - -
Adu09g00025 1100 PRINTS P-type cation-transporting ATPase superfamily signature 803 822 - -
Adu09g00025 1100 PRINTS P-type cation-transporting ATPase superfamily signature 315 329 - -
Adu09g00025 1100 PRINTS P-type cation-transporting ATPase superfamily signature 827 839 - -
Adu09g00025 1100 Gene3D - 488 848 IPR023214 -
Adu09g00025 1100 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 708 IPR023299 GO:0000166
Adu09g00025 1100 PANTHER CALCIUM-TRANSPORTING ATPASE 55 1080 - -
Adu09g00025 1100 Gene3D - 188 367 - -
Adu09g00025 1100 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 153 1066 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Adu09g00025 1100 Gene3D - 501 703 IPR023299 GO:0000166
Adu09g00025 1100 PRINTS Sodium/potassium-transporting ATPase signature 615 633 - -
Adu09g00025 1100 PRINTS Sodium/potassium-transporting ATPase signature 484 505 - -
Adu09g00025 1100 PRINTS Sodium/potassium-transporting ATPase signature 250 270 - -
Adu09g00025 1100 Pfam E1-E2 ATPase 304 470 - -
Adu09g00025 1100 SUPERFAMILY HAD-like 489 908 IPR036412 -
Adu09g00025 1100 SFLD Haloacid Dehalogenase 473 855 - -
Adu09g00025 1100 MobiDBLite consensus disorder prediction 1 59 - -
Adu09g00025 1100 Pfam Cation transporting ATPase, C-terminus 888 1063 IPR006068 -
Adu09g00025 1100 Gene3D - 215 1054 - -
Adu09g00025 1100 PANTHER CATION TRANSPORTING ATPASE 55 1080 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00025 Adu-Chr9 219835 231290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00025 44 1086 Primary Pumps ATPases AT3G21180 72.856 0.0 1561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00025 K01537 - gmx:100777143 1682.15