Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02898 ATGGAGTCTCGTTACTTTCATGACATTTTATATGATGCTAGTGCTACTACTCCTCCTCCTCTTCCCACTCATCCAATATTAAGTAGCATGCAAGGTTGGTTGGTTTTAACTAAGTTTGAATTTGATATGGATGTTGTAGAGCGTTGTGATGAAGAAAGTGATAATGCAGAGAATGAATACGTGGATAATGCATGGAAGGAAATGAGCAAGGATAAGGGTAAGGATAAGAAGGGCTTAACAAGGAAGAGCATTTCTGAGTGCTTCTACATGCCCATAGCAGAAGCGGCGAGACACCTCAAGGTGGGTCTCATACATCTCAAGAGAAGGTGGAGGGACTTAGGCATTCAGAGGTGGCCTCACAGGAAGCTCATGAGTCTTCAAACCCTAATCAACAATCTGCAGCAGCAGCAGGAGGAGGGAGTTGATGAGGATGAGAGCAGCAGAATACTTGCAACTGGAGACCACACCAAAAGGCTAAGACAAGCATGCTTTAAAGCCAACTACAACAAGAGGAGGAAGCAGCCAGTGCAACCAAACATCATGATCCTCATTCTCACTTTAACAAACCCCTTTAATTAG 579 0.4387 MESRYFHDILYDASATTPPPLPTHPILSSMQGWLVLTKFEFDMDVVERCDEESDNAENEYVDNAWKEMSKDKGKDKKGLTRKSISECFYMPIAEAARHLKVGLIHLKRRWRDLGIQRWPHRKLMSLQTLINNLQQQQEEGVDEDESSRILATGDHTKRLRQACFKANYNKRRKQPVQPNIMILILTLTNPFN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02898 192 PANTHER PROTEIN RKD1-RELATED 52 173 - -
Adu08g02898 192 Pfam RWP-RK domain 79 126 IPR003035 -
Adu08g02898 192 ProSiteProfiles RWP-RK domain profile. 61 146 IPR003035 -
Adu08g02898 192 PANTHER PROTEIN RKD4 52 173 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02898 Adu-Chr8 45452035 45452613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02898 77 180 AtRKD Transcription Factor Family AT1G18790 47.541 1.87e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu08g02898 RWP-RK 4.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02898 - - adu:110274768 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02898 08 45452035 45452613 Adu08g02898 08 45452035 45452613 ECH
Adu01g03280 01 105490248 105491811 Adu08g02898 08 45452035 45452613 PCT