Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02875 ATGAGGGGTCGTAGGAGGATGAGGAAGATCCGTTTGAGCAAGATCTATTCATTTGCATTGTGTGGTAAAGGAACCTTAGAGGGAGAACATTCACAGATTGGGGGGCAGGGTTTTTCCAGGGTGGTGTTCTGCAATGAGGAAGGGGTTATGCAAAATTATTCAGATAATTCTGTGAGGTCCACAAAATATACTGCTGTCAGTTTCTTGCCAAAGTCACTGTTTGAGCAGTTTAGGAGGGTTGCTAATTTCTATTTCTTGGTCATTGGTGTCTTGGCAATGACAAAGCTTGCTCCTTACACTGCTGTCAGCGCAATCGTTCCTCTCTGTGTCATCGTTGGGGCAACCATGATCAAAGAGGGTATTGAAGATTGGCGTCGCAAGACACAGGATATTGAGGTGAACAATAGAAAAGTCAAAGTGCATAAAGGTGATGGTGTTTTTGAATATACCGAATGGAAGAATCTGAGGGTGGGGAATATAGTTAAGGTAGAGAAGGATAATTTTTTCCCTGCAGACCTCTTATTGCTTTCATCCAGTTATGAGGATGCAGTGTGTTATGTTGAGACCATGAACTTAGATGGAGAGACAAATTTGAAGTTAAAACAAGGATTGGACGTAACTTCTTCCTTACAGGACGACTCCAACTTCCGTGATTTTAAGGCTGTAGTTAAATGTGAAGACCCAAATGCAAATTTGTACTCATTTATTGGGAGCCTGGAGTTTGAAGAGCAAAAATATCCCCTTTCTCCTCAGCAACTTCTTTTGAGAGACTCCAAACTTCGTAATACAGACTATGTATTTGGAGCCATCATCTTCACTGGTCATGACACCAAGGTCATTCAAAACTCTACTGACCCCCCTTCGAAAAGAAGCAAAATTGAGAGAAAGATGGACAGAATTATTTACTTCTTGTTTTGTCTTTTGTTTCTAATTGCATTTGTTGGATCTATTCTCTTTGGCATTGCAACTAAGGATGAGTTGGACAACGGGGTGATGAAAAGATGGTATCTGAGGCCCGATGATTCCACGATATTCTTTGATCCAAAAAGAGTTGCTTCAGCTGCCATATTTCATTTTTTGACTGCTTTAATGTTATACGGCTTCTTCATTCCTATCTCCTTGTATTTTTCTATCGAATTGGTGAAAGTCCTTCAAAGCATCTTCATCAATCAAGATGTCCATATGTACTATGAAGAAGCAGACAAGCCAGCCCATGCCCGCACTTCAAACTTGAATGAGGAACTAGGCCAAGTTGATACTATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCCATTGCTGGAGTAGCTTATGGCCAAGGTGTTACAGAGGTTGAGCAGGCCATGGATAGAAAAATTGGTTCTCCTTTGACTCATGAGCAGGTTTATGGGACAGAATCAGAATCAGATGAAAACAGGAAGTCTTCTGATAGAAAAACACGCATCAAAGGTTTTAACTTTACGGATGAAAGGATAATGAATGGGAACTGGGTTAATGAGCCTCATGCAGATGTTATACAGAAATTTTTTCGCGTATTGGCAATCTGTCACACCGCCATACCGGAAGTGGATGAAGATACAGGAAATGTCTCATATGAGGCTGAATCTCCAGATGAAGCTGCGTTTGTGATTTCTGCTAAAGAAATTGGTTTTGAATTCTTTAAAAGGACTCAGACTAGTTTATCAGTTAATGAATGGGATCCAGTTTCTGGAAACAAAGTGGAAAGAATGTACCAGCTTCTTAATGTATTAGAATTCAATAGCTCAAGGAAGCGAATGTCGGTAATAGTAAAAGATGAAGAAGGGAGAATTTCGCTACTCTGTAAAGGGGCTGACAGTGTCATGTTTGAAAGGCTTGCCTTGAATGGGAGAGAGTTTGAAGATAAAACCTTGGAGCATGTGCAGCAATATGCTGATGCAGGTCTAAGGACCCTGATACTGGCCTATCGTGAACTTGATGAGAATGAATACAAGGAGTTCAATAATGCATTTTACGAAGCGAAAAATTCAGTTACTGCAGATCAGGAGACGCTAATTGAGGAAGTATCAAATAAAATTGAGAGGAATCTAATCCTTCTAGGTGCCACTGCTGTAGAGGACAAGCTACAAAATGGGGTTCCTGATTGCATTGAAAAGCTTGCTCGTGCTGGAATTAAGATTTGGGTTTTAACTGGGGACAAAATGGAGACTGCCATTAATATTGGTTTTTCTTGTTGTTTGCTTAGACAAGGGATGAGACAGATTATAATTCATTTGGATGCTCCAGAAATTCAAGCATTGGAGAAGGGTGGTGACAAGATGGCTATTTCCAAGGCATCAAGGGAAAGTGTCCTCCGTCAGATATCAGAAGCTGCTCTCCAGCTTACTGCATCCAGAGGAGCCTCTCAGCAGGCATTTGCTCTGATTATTGATGGAAAGTCACTTGCATATGCTCTGGACGATAGTATGAAGAACTTGTTTCTGGAGCTCGCAATTCGTTGTGCATCAGTTATCTGCTGTCGCTCGTCACCCAAGCAAAAGGCACTGGTTACTAAATTAGTCAAATCTGGAACCCGTAAAACAACTTTAGCTATTGGTGACGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATCAGTGGTTTCGAAGGGATGCAGGCTGTGATGTCCAGTGATATTGCAATTGCACAGTTCTGGTATTTGGAAAGATTGCTTCTTGTACATGGTCATTGGTGTTACCGGAGGATGTCATCAATGGTATTGCGGCACTAA 2790 0.4115 MRGRRRMRKIRLSKIYSFALCGKGTLEGEHSQIGGQGFSRVVFCNEEGVMQNYSDNSVRSTKYTAVSFLPKSLFEQFRRVANFYFLVIGVLAMTKLAPYTAVSAIVPLCVIVGATMIKEGIEDWRRKTQDIEVNNRKVKVHKGDGVFEYTEWKNLRVGNIVKVEKDNFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLQDDSNFRDFKAVVKCEDPNANLYSFIGSLEFEEQKYPLSPQQLLLRDSKLRNTDYVFGAIIFTGHDTKVIQNSTDPPSKRSKIERKMDRIIYFLFCLLFLIAFVGSILFGIATKDELDNGVMKRWYLRPDDSTIFFDPKRVASAAIFHFLTALMLYGFFIPISLYFSIELVKVLQSIFINQDVHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGQGVTEVEQAMDRKIGSPLTHEQVYGTESESDENRKSSDRKTRIKGFNFTDERIMNGNWVNEPHADVIQKFFRVLAICHTAIPEVDEDTGNVSYEAESPDEAAFVISAKEIGFEFFKRTQTSLSVNEWDPVSGNKVERMYQLLNVLEFNSSRKRMSVIVKDEEGRISLLCKGADSVMFERLALNGREFEDKTLEHVQQYADAGLRTLILAYRELDENEYKEFNNAFYEAKNSVTADQETLIEEVSNKIERNLILLGATAVEDKLQNGVPDCIEKLARAGIKIWVLTGDKMETAINIGFSCCLLRQGMRQIIIHLDAPEIQALEKGGDKMAISKASRESVLRQISEAALQLTASRGASQQAFALIIDGKSLAYALDDSMKNLFLELAIRCASVICCRSSPKQKALVTKLVKSGTRKTTLAIGDGANDVGMLQEADIGIGISGFEGMQAVMSSDIAIAQFWYLERLLLVHGHWCYRRMSSMVLRH 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02875 929 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Adu08g02875 929 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Adu08g02875 929 CDD P-type_ATPase_APLT_Dnf-like 55 927 - -
Adu08g02875 929 SUPERFAMILY Calcium ATPase, transduction domain A 137 281 IPR008250 -
Adu08g02875 929 Pfam Cation transport ATPase (P-type) 535 626 - -
Adu08g02875 929 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 703 IPR023299 GO:0000166
Adu08g02875 929 SFLD Haloacid Dehalogenase 404 917 - -
Adu08g02875 929 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 927 IPR032630 -
Adu08g02875 929 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 926 - -
Adu08g02875 929 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 837 926 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu08g02875 929 Gene3D - 701 904 IPR023214 -
Adu08g02875 929 SUPERFAMILY HAD-like 417 921 IPR036412 -
Adu08g02875 929 MobiDBLite consensus disorder prediction 472 488 - -
Adu08g02875 929 Pfam Phospholipid-translocating ATPase N-terminal 44 104 IPR032631 -
Adu08g02875 929 Gene3D - 567 700 IPR023299 GO:0000166
Adu08g02875 929 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 926 - -
Adu08g02875 929 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 53 927 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Adu08g02875 929 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Adu08g02875 929 SFLD p-type atpase 404 917 IPR044492 -
Adu08g02875 929 MobiDBLite consensus disorder prediction 464 488 - -
Adu08g02875 929 Gene3D - 114 284 - -
Adu08g02875 929 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 926 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02875 Adu-Chr8 45248277 45254468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02875 10 926 Primary Pumps ATPases AT1G68710 73.922 0.0 1437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02875 K01530 - gmx:100798329 1523.84