Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02872 ATGGCGCTGTTCAAAAAGTTCTTCTACCGGAAGCCGCCGGATCGACTCCTTGAGATCTCCGAGAGGGTCTTTGTATTTGACTGTTGCTTCTCGGCGGATATGCTTCAATCATGGTATTCAATTTCAGAGAACGGGAAACGCGGAGCCAGAAGATATCTCCAGTATGTTTCCAGAAGACAATTGGGTTCTGAGTGGCCTCCACAAGAAACACCCTTGCTTTTGGACTATTTGATCCTCAGAAACCTTCCATTGTTTGATGGTGGAGAAGGTTGCAGGCCTATTGTTCGTGTCTATGGTCCAGACCCTACAAGACCTGACAATAGTAGCTCTAAAATTCTTTTCCGAACTCCAGGTTCCCTCGTTCAACACTACCCGCAGGCAGAATGTACGCTCGTGAAAATTGATATCCATTGTCGTGTTCAAGGGGATATTGTTCTTGAATGCATACATTTGAGTGAAGATTTAGTTGGGGAGGAAATGATGTTTAGAATAATGTTTCATACTGCATTTGTTCGCTCAAACACATTGATCTTGAGTCGTGACGATATTGATGTTGTGTGGGATTCAAAGGAGCAGTTCCCCAAGGACTTTAAAGCAGAGGTGCTTTTCTTGGACGCTTATGCTCTTGTACATAATCTATCCCCAATCAACGTAAGCCGAGATGTAAATGACAGTGAGAGTGATTCACCGGATGAGTTTTATGAAGTGGAAGAGATCTTTACGAATGCAATTGATGCACTTGAAGGTAGAGGAGAATTTGGCTCTCCTATGGTCCGTGATGATAGAAGTCATATAGACATTTGGAAAGATTCTTCAGATCCTCAAGCTTCTACTTCAGATGATGGGAGTCACCAACATATGGTCCGTGATGATAGAAGTCATATAGATATTGATCCTCAAGCCTTTACTTCAGATGATGGGAGTCACCAACATATGGTCCATGATGATAGAAGTCATATAGACATTTGGAAAGATTCTTCAGATCCTCAAGCCTTTACTTCAGATGATGGGAGTCACCAACAGGAGGTTGAAAGGGTACAATCCGATATTAATACAGTTAAAGACATTGCTGTTGCCTCTACTTCAGATGATGGGAGTCACCAACAGGAGGTTGAAAGGATAGAATCCAGTATTAATACAGTTAAAGATATTGATGTTGATGATGTCAAATACAAGTTTCAAGAAATAGCAGATTTGGATCCTCATGAGGTTAAAGATATTATTGTGGATGAGGTCGAGATTAAGTCGAATTCAATTGCAGACAAGATGGATTTAGAAGATGAGATAACAATTATAAACAAGAATTTTGATGAAAGGGAAGAAAAGCATGATCTTTCTATGTCACATTCTGATCATAAACTACATCCATCTACTGAAAAGAAGCATCATTCTCCCAAGTTAAAGATTAAACATCATGAACAACATAGTCACGAACAACATGGTGCTGAGACAAAACATCGCCACGAACAACATGGTGCCGAGGCAAAGCATAAACACGAACATAGTGTTGAGGCAAAGCATCAGCACGAACAACAGGGTGTTGAGGGAAGACGACATCATCAGGAACATAATGAACATCATGGTCACGAGGGAAAGCATGCAAAGGCAAGTGTAGCAGCTAAGTGGATTCCAAGTAACAAGGGTTCTTACCAGGATTCAATGCATGTATATTATCCAGCGTCAAGCCCCCATTACGTACCAATGAGTCCTCGAGGAAGGTCTCATAGTATTTCCCATCTTTCTGAGTTGAAAAGTCCTAAAGGGAGGAGCACTTCAAAATCTTTAGAACATATAGAACTTGATACTACCTCTCCATCATCATCCTCACCTTCACTTAAAGACCCACCTCTTGAGTCAACCACTCAAGAACCACACCTTAATTCAAATCCAATACTTCTGCCAGTACCTCCTCCACCCCCACCCCCACCCCCATCTATTGGGGAATTATCAAATGTAGTCTCCCTTTCTAATTCACCACCACCCCCTCCACCTCCACCTCCACCACTACCACCACCTTTTTCAAAATATGGAGTTCCAACAATTCCTCCACCTTCCCCTCTCTATATTCCCTTTACACAAGAAGATCCTAGACATCTTCTCTTGCCAACCTCCACTACATCATTTCAAGTTCCACCACCACCACCTTTACCACCATCATCCTTGACTTTACCATCCTTCACTAATGTAGATAGTAATCCACCACCACCCTCTCTTTTACCTGAATGTCTACCAACACAACCTCCATCTCCCTTGATTACATGTCCACCACCGCCACCGCCACCGCCACCACCACCGCCACGGCCTCTACCCCCACCCATTTCAAGTAAGGCTTCACCGCCACCACTACATTCTTCTCCATTAAATGAATTACTTGAAACACCACCACCACTATTTCCTTCATCAAGTGGAGCACCACCTATACCACAACCTCCTCCACCAACACCAGCACTTCCTTCATCAAGTGGAGAACCACCTGCTCCTCCATCAAATGCACCACTATCAACACCACCATCACTACTTGCTTCATCAAGTGGTGCACCACCTATACTACCACCAGCTCTTCCTCTATCACACGAAGCAGCAGCACCACCACCATCACTTCCTTCGTTAAGTGTAGCACTACACATGCCACTACCTCGCCCTCCTCCACCAATTTATAGAAATCAACCTCCTCCACCTCCTCCAATGAATGAATCACCCTCTCCTCCACCCACTCCTCCGCCTACTCCTCCGCAACCTCCAATGCATGCTATATCCCCTCTGACAATGCATGCAGCACTATCTCCTCCCCCACCTTCTCCGCCACCTACACCACCTCCTCCGCCACCTCCTCCACTTCCAATGTCAGGAGCGCCACCACCTCCACCACTTCCAGAAGGCCGTGGCCCACCTCCGCCACCTCCAATGCCCAGAGCACCACCGCCACCTCCAATGCCCGGAGCGCCACCACCTCCACCACCTCCATTTCCCGGAGCACCACCGCCACCTCAGATGCCCGGGGCGCCACCTCCTCCACCTCGAATGCCCGGAGCGCCTCCACCTCCTCCAATGCCTGGAGCACCTCAGCCACCTCCACCTCCAGATGGAGGTCGAGGACCAGGCCCTCCTCCGCCTCCTCCTCCTGGAAGTCGAGGACCAGGCCCACCTCCGCCTCCTGCTCCTGGACGTGGTGGCCCAGGCCCACCTCCGCCTCCTGGTAGTCTTCCAGGTGGTGGACCTCCACCGCCTCCCATGGGAAGAGGTGGTGGAGCTGCTAGAGGGCGTGGGCTCACACGTACTACAGCGATGCCTCGACGATCCCCTTTTAAGCCTTTGCATTGGAGTAAGGTTAGCAGGGCAATGCAAGGGAGCTTATGGGAAGAATTGCAAAGAAGTGCGGAACTTCAAACTGCACAAGAGTTTGACGTTTCAGAGCTGGAGAAGCTTTTTTCTGCAAGTGCTCCAAAAGCTGCTGATAAATCTGCCAAATCCAAAGCTGCTGCACCCAAAACTGATAAAGTCCAGTTGATCGATTTACGAAGGGCCTATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGACATGATGGCAGCAGTGCTAGCCATGGATGAGACGGTGTTAGATGGTGATCAGGTGGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAGATGGAAACTTTGAAGGGATACACTGGTGACCCGGAGGCTTTAGGAAAATGTGAACAGTATTTTATGGAGCTGATGAAAGTGCCAAGAGTGGAGGCAAAATTAAGAGTGTTCTCTTTCAAGATTCAGTTTGGGACTCAGGCTGAAGACTTCAAGAGGAGTTTAAACACTGTGAACTCTGCCTGTGATGAGGTCCGAAATTCAGTTAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAACACATTGAATGAAGGCACTGCAAGGGGAGCTGCAGTTGGGTTCAAGTTGGATAGTCTCTTAAAGCTTACTGACACTCGAGCTACTACGGGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGAAAAGTCTCCATCACTCCTTGATTTTCACCTTGACCTAGTTAACCTGGAAGCAGCCACTAAGATACAATTGAAGATGTTAGCAGAAGAAATGCAGGCACTCATCAAGGGATTAGAAAAGCTTAAACAGGAGCTTGCTGCATCTGAAACTGATGGCCCCGTGTCTGATGTTTTCCGTAAGACACTTAAAGAATTCCTTTCTATAGCGGAGTCGGAGGTGGAATCTGTAACAAACCTATATTCTTCAGCGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCAGCTCGCTGTCCATTTGAGCAAGTTACTGCTACTCTCTTGAATTTTACAAGACTGTTCCGAAAATCACATGATGAAAATGTCAAACAAGCGGAGGCAGATAAGAAGAAAGCGGAGAAAGAGGCTGAAATGGAGAGGGAGAAGGCTAAAGCCGGGACGCCAAGAAAGGGAGACGGCCAGACACCGAGGAAGTTTGATAGAGACATGGATGGCCAGACGCCAAGGAAGTCTGACATGGATGGCCAGACACCGAGGAAGTTTGACATGGATGGCGAGACACCGAGGAAGTTCGATAGAGAGATAGATGCGGAGACACCAAGAAAGGGTGACAAAGAGATGGAAGAAAGCTGA 4680 0.466 MALFKKFFYRKPPDRLLEISERVFVFDCCFSADMLQSWYSISENGKRGARRYLQYVSRRQLGSEWPPQETPLLLDYLILRNLPLFDGGEGCRPIVRVYGPDPTRPDNSSSKILFRTPGSLVQHYPQAECTLVKIDIHCRVQGDIVLECIHLSEDLVGEEMMFRIMFHTAFVRSNTLILSRDDIDVVWDSKEQFPKDFKAEVLFLDAYALVHNLSPINVSRDVNDSESDSPDEFYEVEEIFTNAIDALEGRGEFGSPMVRDDRSHIDIWKDSSDPQASTSDDGSHQHMVRDDRSHIDIDPQAFTSDDGSHQHMVHDDRSHIDIWKDSSDPQAFTSDDGSHQQEVERVQSDINTVKDIAVASTSDDGSHQQEVERIESSINTVKDIDVDDVKYKFQEIADLDPHEVKDIIVDEVEIKSNSIADKMDLEDEITIINKNFDEREEKHDLSMSHSDHKLHPSTEKKHHSPKLKIKHHEQHSHEQHGAETKHRHEQHGAEAKHKHEHSVEAKHQHEQQGVEGRRHHQEHNEHHGHEGKHAKASVAAKWIPSNKGSYQDSMHVYYPASSPHYVPMSPRGRSHSISHLSELKSPKGRSTSKSLEHIELDTTSPSSSSPSLKDPPLESTTQEPHLNSNPILLPVPPPPPPPPPSIGELSNVVSLSNSPPPPPPPPPPLPPPFSKYGVPTIPPPSPLYIPFTQEDPRHLLLPTSTTSFQVPPPPPLPPSSLTLPSFTNVDSNPPPPSLLPECLPTQPPSPLITCPPPPPPPPPPPPRPLPPPISSKASPPPLHSSPLNELLETPPPLFPSSSGAPPIPQPPPPTPALPSSSGEPPAPPSNAPLSTPPSLLASSSGAPPILPPALPLSHEAAAPPPSLPSLSVALHMPLPRPPPPIYRNQPPPPPPMNESPSPPPTPPPTPPQPPMHAISPLTMHAALSPPPPSPPPTPPPPPPPPLPMSGAPPPPPLPEGRGPPPPPPMPRAPPPPPMPGAPPPPPPPFPGAPPPPQMPGAPPPPPRMPGAPPPPPMPGAPQPPPPPDGGRGPGPPPPPPPGSRGPGPPPPPAPGRGGPGPPPPPGSLPGGGPPPPPMGRGGGAARGRGLTRTTAMPRRSPFKPLHWSKVSRAMQGSLWEELQRSAELQTAQEFDVSELEKLFSASAPKAADKSAKSKAAAPKTDKVQLIDLRRAYNTEIMLTKVKMPLPDMMAAVLAMDETVLDGDQVENLIKFCPTKEEMETLKGYTGDPEALGKCEQYFMELMKVPRVEAKLRVFSFKIQFGTQAEDFKRSLNTVNSACDEVRNSVKLKEIMKKILYLGNTLNEGTARGAAVGFKLDSLLKLTDTRATTGKMTLMHYLCKVLAEKSPSLLDFHLDLVNLEAATKIQLKMLAEEMQALIKGLEKLKQELAASETDGPVSDVFRKTLKEFLSIAESEVESVTNLYSSAGRNADALALYFGEDPARCPFEQVTATLLNFTRLFRKSHDENVKQAEADKKKAEKEAEMEREKAKAGTPRKGDGQTPRKFDRDMDGQTPRKSDMDGQTPRKFDMDGETPRKFDREIDAETPRKGDKEMEES 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02872 1559 SMART it6_source 659 1528 IPR015425 -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 441 536 - -
Adu08g02872 1559 PRINTS Proline rich extensin signature 701 718 - -
Adu08g02872 1559 PRINTS Proline rich extensin signature 743 768 - -
Adu08g02872 1559 PRINTS Proline rich extensin signature 604 616 - -
Adu08g02872 1559 PRINTS Proline rich extensin signature 679 695 - -
Adu08g02872 1559 PRINTS Proline rich extensin signature 656 677 - -
Adu08g02872 1559 Pfam C2 domain of PTEN tumour-suppressor protein 68 203 IPR014020 -
Adu08g02872 1559 Gene3D Formin, FH2 domain 1111 1500 IPR042201 -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 597 628 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 925 1080 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 471 536 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 707 721 - -
Adu08g02872 1559 Coils Coil 1370 1397 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 441 458 - -
Adu08g02872 1559 ProSiteProfiles C2 tensin-type domain profile. 69 206 IPR014020 -
Adu08g02872 1559 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 68 203 IPR035892 -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 656 690 - -
Adu08g02872 1559 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1105 1483 - -
Adu08g02872 1559 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1092 1489 IPR015425 -
Adu08g02872 1559 Coils Coil 422 442 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 848 862 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 630 647 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 568 1108 - -
Adu08g02872 1559 PANTHER FORMIN-J 1 36 - -
Adu08g02872 1559 PANTHER FORMIN-J 808 1496 - -
Adu08g02872 1559 PANTHER FORMIN-J 50 718 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 268 292 - -
Adu08g02872 1559 Gene3D - 72 203 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 1468 1559 - -
Adu08g02872 1559 SMART PTEN_C2_2 67 1145 IPR014020 -
Adu08g02872 1559 Coils Coil 1464 1493 - -
Adu08g02872 1559 Pfam Formin Homology 2 Domain 1098 1463 IPR015425 -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 798 834 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 729 779 - -
Adu08g02872 1559 MobiDBLite consensus disorder prediction 875 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02872 Adu-Chr8 45223574 45231773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02872 51 379 FH2 protein (formin) Gene Family AT5G07740 46.866 6.96e-73 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02872 - - adu:107463462 1368.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02872 08 45223574 45231773 Adu08g02872 08 45223574 45231773 ECH