Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02849 ATGAGTAGCTTACAATGGAAGAAACTGAAAATCTTGGGAGCAGATTCTTATGGCACTGTTTATCTTTCAATTGTTGTTGATACACAAATACTGTATCAGAGCTTCATTGCTGAAAAGAGCTTCATTTCTAGGTTGGCATTGTCACTGAAGAAAGAAGAACAGATTTTTAAACCATTGTGCGAAGGTGAAAGCGGTGGTTGTGAAGAAATCATTCGATGCTTTGGCACTGAGATCACAGTAGAACACGAACGTTACTTTTACAATCGTCTATTGGAGTATACTCCTCACGATTCTTTGGATGACTTGATCCACAAGAAACCTCTCCCGGAGACCGACATCGCGGATTTCGGATTATCTAAGACTAAAGAGGAGGAAACAAATGTTGAGGTTTGGAAGTCCAAGCCTAGAGGTACGCCACTGTATTTGTCGCCGGAGGCATTTTTCGGTCATATTGATGCTCCGATGGATATATGGGCACTTAGTTGTACAATGATTAAAATGCTGACTGGATTGCCTGCATGGGGTGAGAGCTTTTTGCGTACTGAGGAGTATTTAAGGTTCTTCGTTGAGTATCTTGAACTATCACCCAAGAAGCCGAAAGGAATCCGTGTTTTCTGTTATGATTTTCTGGAAAAGTGCTTTATGAAAGATCCTAGCAAGAGGTGGACTGCTGAGAGCAAAAATGCTGACACCAAAGCCACCAGAGCTGCGCGGTGGCGATCCACCGGCATTGTTGCTCTCCGCGACTCCAAATTGAAGACGTTTCCTGACGAAATCCTTGATCTAGACAGAAGTGTGCGCACACTTGACTTAACACATAATCGAATAGTTGACATTCCCATGGAAATAAGCAAATTAATTAATATGCAGCGCCTGATATTGGCGGAGAATGTAATTGAGAGACTGCCAGTGAATTTGGGGAAACTCCAATCTCTAAAACTCATGAACCTTGATGGAAATCAAATTTCTTCCTTGCCTGATGAATTGGGCCAGTTGGTAAGGCTTGAACGCTTATCCATCTCTGGAAATTTGTTAACATCCTTGCCAGCAACTATTGGCAGTTTAAGAAATCTGTTGATTTTAAATGTGTCAAATAACAAGTTACAGTCTCTACCAGAATCCGTTGGTAGTTGCTACTCTTTGGAAGAAATACAAGCTAATGATAATCAAATTGAAGAGCTTCCTGCTTCAGTATGCAATCTCTCTCACTTGAAATCACTTTCCCTAGATAACAATAATGTGAACCAGATACCGCCGAATTTATTGAAAGACTGTAAAGCTCTTCAGAACTTATCACTGCATGGCAATCCAATATCAATGGATCAATTTCAGCAGATGGATGGATTCCAAGAATTCGAAGCCAGAAGGAGAAAGAAGTTTGACAAACAAATTGATGCAAACGTGATGATTAGTTCCAAAGGCCTTGATGAGGAGCTATTATTGCCTGATTCAGCAGTCTGCCATATATTTGTACGACAGTGTTTTAAGGTAATCATGGTGCAGAAGCGTCCATTTGATGCTGAGGAGATGCTCGAGGTTTCCTTCAAACACCAGAAACATGCAGAACCCAGTGATCAGCTTGTTTCATTTTCTGAATCTGTTTTTCCTGATGATGATTGCCACACCCATATGCCTCAAACTTCAGAGGGCGGATGTGGGCAAGGTAGTAATGAAGGTATTGAGAAGCTTGCTGGTGAAAGTATCGGTAAAGGCCCTAGAGGGGCTGAGGACTCTGAAGCTAGTTTTCCTGTAGCTTGGGCTACCAGTAGCACTACTGAACAAGTTGTCAAGTCAGAGTCACCTGTTCATCTTGCTCTTTTTCCTGAGTATTTCCATTCAGAACCATCTGTACATGTTGCTCTTTTCCCTGAGTATTTCAGTCCAGAGAAACCATTTAGGACATTGGCTCGCTATGAGGACATCTATTCCATACTCATTGAAAATCCTCCTCGCAAACTTGTATCTATGGGAGCTAACCATCAGGCTGATATTCCAGTTTGGGATTCTTCGGTTGCTATTGACAGACCAAATGCCTCTGAAGATGTCTCCAATCTAGGCTTCCCCATTGGAGATGATGAGAAAAGGCTGGTGGGGACATGTATAATCCCAATGCCTCAGATGGAGTTGTCTTCTGACAATGATGATGTTGGAAAGGGCAGAACCAATTGTTGGTGTGAAGATAGAGGATCCATCAGATGTGTTAGACAGCATATAGCAGAAGAAAGAGAAAGACTTTTGAAAGAGTTTGGGCATGAGAAGTTTGATGAATTGGGGTTCAATGACATGGGAGAACGTGTGGCAGAAAAATGGAGTGCAGAAGAAGAACGCCTATTTCATGAAGTTGTCTTCAATAATCCAGTTTCCCTTGGCAAGAATTTCTGGCACTATCTCTCCATTGCTCTCCCTTCACGAAGCAAAAAAGAAATAGTTAGTTACTACTTTAACGTCTTCATGCTTCGAAAGCGGGCAGAGCAGAACAGAAACGACGCCTTGAGCATTGACAGTGATAATGATGAATGGCAAGGTAGTGATGGCATTGACATTGCAACTCGAGAGGAAGATGAGGATGACTCTGTTGTAGATTCTCCAGTCGATCAGAATGATATTGGTTTTACCAGCTGCCATGAAAATGATCAACTTGATTATGATGATGAGTTTGCTGCAGATGAAATTTGTGCTGTTAATGGAACTGTAGATTTGACCAAAAGGAACATTGATGATGAGGATGATTCTAAATATGATGCTGTGTCTGTGGCGAGAAGCACTGTCCCAAACCGATTTTGTCCTCCAATACAACCTCATGATCAGACTATTCACAAGGATGATGAAAATGTTAAAGATGAAACATGCACTTTTTCTGACGCCATAGTGTCCTCACAGGAGACCAGAGCGAAGAGCAGTGCTGAAGGTGATCAATGGTGTGGTAACTATAATGAGGTGGCAAGTAATGGCTATAGCAATGGCCATGTGTTGGAGCCTTGCGATGCAAAAGTGTGGGATCCTGCATTTTTGTCTTGCTCTAAAAGTAAGATTGACTTCTTGCCCACTTGCAACATGATAGAAGAAATCTTTGGAGATGGAAGAAGGCAAGACATGAGAAAAGGTTGA 3108 0.4189 MSSLQWKKLKILGADSYGTVYLSIVVDTQILYQSFIAEKSFISRLALSLKKEEQIFKPLCEGESGGCEEIIRCFGTEITVEHERYFYNRLLEYTPHDSLDDLIHKKPLPETDIADFGLSKTKEEETNVEVWKSKPRGTPLYLSPEAFFGHIDAPMDIWALSCTMIKMLTGLPAWGESFLRTEEYLRFFVEYLELSPKKPKGIRVFCYDFLEKCFMKDPSKRWTAESKNADTKATRAARWRSTGIVALRDSKLKTFPDEILDLDRSVRTLDLTHNRIVDIPMEISKLINMQRLILAENVIERLPVNLGKLQSLKLMNLDGNQISSLPDELGQLVRLERLSISGNLLTSLPATIGSLRNLLILNVSNNKLQSLPESVGSCYSLEEIQANDNQIEELPASVCNLSHLKSLSLDNNNVNQIPPNLLKDCKALQNLSLHGNPISMDQFQQMDGFQEFEARRRKKFDKQIDANVMISSKGLDEELLLPDSAVCHIFVRQCFKVIMVQKRPFDAEEMLEVSFKHQKHAEPSDQLVSFSESVFPDDDCHTHMPQTSEGGCGQGSNEGIEKLAGESIGKGPRGAEDSEASFPVAWATSSTTEQVVKSESPVHLALFPEYFHSEPSVHVALFPEYFSPEKPFRTLARYEDIYSILIENPPRKLVSMGANHQADIPVWDSSVAIDRPNASEDVSNLGFPIGDDEKRLVGTCIIPMPQMELSSDNDDVGKGRTNCWCEDRGSIRCVRQHIAEERERLLKEFGHEKFDELGFNDMGERVAEKWSAEEERLFHEVVFNNPVSLGKNFWHYLSIALPSRSKKEIVSYYFNVFMLRKRAEQNRNDALSIDSDNDEWQGSDGIDIATREEDEDDSVVDSPVDQNDIGFTSCHENDQLDYDDEFAADEICAVNGTVDLTKRNIDDEDDSKYDAVSVARSTVPNRFCPPIQPHDQTIHKDDENVKDETCTFSDAIVSSQETRAKSSAEGDQWCGNYNEVASNGYSNGHVLEPCDAKVWDPAFLSCSKSKIDFLPTCNMIEEIFGDGRRQDMRKG 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02849 1035 SMART LRR_typ_2 286 308 IPR003591 -
Adu08g02849 1035 SMART LRR_typ_2 309 331 IPR003591 -
Adu08g02849 1035 SMART LRR_typ_2 355 378 IPR003591 -
Adu08g02849 1035 SMART LRR_typ_2 332 354 IPR003591 -
Adu08g02849 1035 SMART LRR_typ_2 401 424 IPR003591 -
Adu08g02849 1035 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02849 1035 CDD SANT 769 817 IPR001005 -
Adu08g02849 1035 ProSiteProfiles Leucine-rich repeat profile. 357 378 IPR001611 GO:0005515
Adu08g02849 1035 SUPERFAMILY Protein kinase-like (PK-like) 6 226 IPR011009 -
Adu08g02849 1035 ProSiteProfiles Leucine-rich repeat profile. 311 332 IPR001611 GO:0005515
Adu08g02849 1035 Gene3D Ribonuclease Inhibitor 238 469 IPR032675 -
Adu08g02849 1035 PANTHER DNA BINDING PROTEIN 499 1031 - -
Adu08g02849 1035 PANTHER DNA BINDING PROTEIN 499 1031 - -
Adu08g02849 1035 Pfam Leucine rich repeat 381 438 IPR001611 GO:0005515
Adu08g02849 1035 Pfam Leucine rich repeat 264 322 IPR001611 GO:0005515
Adu08g02849 1035 SUPERFAMILY L domain-like 235 440 - -
Adu08g02849 1035 SMART serkin_6 6 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02849 1035 SMART LRR_bac_2 355 374 - -
Adu08g02849 1035 SMART LRR_bac_2 401 420 - -
Adu08g02849 1035 SMART LRR_bac_2 332 351 - -
Adu08g02849 1035 SMART LRR_bac_2 380 397 - -
Adu08g02849 1035 SMART LRR_bac_2 309 328 - -
Adu08g02849 1035 MobiDBLite consensus disorder prediction 540 559 - -
Adu08g02849 1035 Gene3D Transferase(Phosphotransferase) domain 1 91 228 - -
Adu08g02849 1035 Pfam Protein kinase domain 112 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02849 1035 ProSiteProfiles Leucine-rich repeat profile. 265 286 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02849 Adu-Chr8 45025542 45038146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02849 4 225 MAP Kinase Kinase Kinase AT4G36950 29.588 5.86e-27 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Adu08g02849 Pkinase 1.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02849 - - aprc:113873168 718.383