Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02846 ATGCAGAGCGTGGCTTTCACTCTCTCTCCCTCCCTCCCTCTCCGCACTCCCCACGCGCCTCGCTCCGCTTCCCTCTCTTTCCATCCATTGCGTCTCTCTGCTTCCAAATCCGATCCCGTTACCTCCAATGCAACCTCTTCTTCCTTCACGCGCCGATCCTGGCTTCATTCTTCTTCTTCCTCCTTTAAGTTCCGCCCGCGCGATTCCGATCTCGACGCCCGCGCTCGCTTCGAGGCAAGAGCCGCCTCCGTTCCCGAAAGCGCCAGCGGAGACGCCGCTGCCTCCGGCGGCTTGCTCAAGACTCTTGAGCTTGGCTCCCTCTTCGGCCTCTGGTACCTATTCAACATCTACTTCAATATCTACAATAAGCAGGTCTTGAAGGTGTATCAATTTCCGGTGACTGTGACCCTTGTTCAATTTGCTGTTGGAACTGTCCTTGTGTCGTTTATGTGGGGTTTGAATCTGTACAAGAGACCGAAGATCACTGGTGCTCAGCTTGCAGCAATACTGCCACTGGCTCTCGTGCATACTTTTGGAAATCTTTTCACCAATATGAGTCTTGGAAAGGTGGCTGTGTCGTTCACACACACAATCAAAGCCATGGAGCCTTTCTTTTCAGTGGTCTTTTCCGCAATGTTCCTTGGAGAGATGCCTACACCATGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGTGTTGCATTGGCATCTGTGACTGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAACGTGTTGAATCAATCTCGTAATGTTCTTAGCAAAAAAGTCATGGTTAAGAAAGAGGATTCTATGGATAACATAACCCTCTTCTCTATTATAACGATCATGTCCTTCTTCTTGTTAGCACCTGTGGCTTTCGTCATGGAGGGTGTCAAATTTACCCCTACTTACCTGCAATCTGCTGGTTTAAATGTGAGACAAGTGTACATTAGATCTGTACTTGCTGCACTCTGTTTCCATGCATATCAGCAAGTTTCTTACATGATATTGCAGAGAGTATCACCTGTTACTCACTCTGTTGGCAACTGTGTGAAGAGGGTTGTGGTTATTGTTAGCTCTGTCATCTTCTTCCAAACACCTGTCTCTCCTGTGAACGCTTTCGGAACTGCTGTAGCTCTTGCTGGAGTTTTCCTATACTCAAGGGTGAAGAGGATTAAGCCAAAGGCCAAGACAGCTTAA 1215 0.4848 MQSVAFTLSPSLPLRTPHAPRSASLSFHPLRLSASKSDPVTSNATSSSFTRRSWLHSSSSSFKFRPRDSDLDARARFEARAASVPESASGDAAASGGLLKTLELGSLFGLWYLFNIYFNIYNKQVLKVYQFPVTVTLVQFAVGTVLVSFMWGLNLYKRPKITGAQLAAILPLALVHTFGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVFSAMFLGEMPTPWVVGSLVPIVGGVALASVTEASFNWAGFWSAMASNVLNQSRNVLSKKVMVKKEDSMDNITLFSIITIMSFFLLAPVAFVMEGVKFTPTYLQSAGLNVRQVYIRSVLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAVALAGVFLYSRVKRIKPKAKTA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02846 404 Pfam Triose-phosphate Transporter family 103 392 IPR004853 -
Adu08g02846 404 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 73 377 - -
Adu08g02846 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 316 396 - -
Adu08g02846 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 238 - -
Adu08g02846 404 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 102 402 IPR004696 GO:0016021|GO:0022857|GO:0055085
Adu08g02846 404 PANTHER SOLUTE CARRIER FAMILY 35 73 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02846 Adu-Chr8 45014646 45018349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02846 1 404 Antiporters AT5G33320 72.155 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02846 K15283 - gmx:732612 577.015