Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02828 ATGGCCAACAGCCAAACACGCCCCAACTCCACCACGGTAGATCCAAACAGTGGTTTCAACCCACATTCCAGAACCTTCCACAGCCTCCGCCCTAACGTCCCCCTCCCTCCGCCCTCTCAGCCTCTCTCAATCACCGAATACGCACTCTCTCTCATCCCCTCCGCCGCCACCTCCACCGACGGCGCAACTACTGCTCTCATCGACGCCGCCGCGGACATCCGCCTCTCCTACCCTCTCCTCCTCCGCCGCATAAAATCCCTCTCAATCTCCCTCCAATCCTTCACACCACTCAAAAAAGGACACGTGGCACTCATACTCACCCCTCCTTCCGTACACGTTCCCGTTCTCTATTTTTCCCTCTTATCCCTCGGAATCGTTATTTCTCCCGCCAACCCTCTCAGCTCCCCGGCCGAGTTAACTCACCTCATCCAACTCGTGAACCCTAAAATCGCCTTCACAACTTCCGAAACTGCCGCGAAAATCCCCAAACTACCCCTCGGCACCATCCTCCTCGACTCGCCGGAGTTCCTCTCCATGCTCGAGAACAAAGAGTCAGTAACTAGCGAACTCGAACGAGTCGAGGTGAGTCAGTCAGAGCCAGCAGCGATTCTTTTCTCTTCCGGAACCACGGGAAGAGTAAAAGGGGTTCTCCTCACACACGGGAACCTCATCGCTCTAATTGGAGGGTTCTGCCACCTGAAACACATGACGGCGGCGCCAGAAGAGTCACCGGAGGAGGAGAACTGGGTGGCGCTGGTGACGGTGCCGTTGTTCCACGTGTTCGGGTTCTTCATGCTGATAAGAGGCTTAGCGATGGGTGAAACGATGGTTCTAATGGAGAGGTTCGATTTCGAAGGGATGCTGAGGGCGGTGGAGAAATACAAGGTGAATTACATGCCAGTGTCGCCGCCGCTGGTGGTGGCGCTGACGAAGTCGGAGGTGGCAAAAAAGTATGATCTGAGTTCGTTGCGGTTGTTAGGGTCCGGTGGTGCTCCGCTGGGAAAAGAGGTGGCGGAGAATTTCGGTGCTAAGTTCCCCAACGTGGAAATTGTGGAGGGGTATGGTCTAACTGAAAGTTCAGGAGGAGCAGCAAGGATGATAGGACCTGATGAGGCGAAACGACATGGTTCTGTTGGTCGATTAGCTGAGCAAATGGAGGCTAAGATAGTTGATCCTATCACCGGCGAATCGTTGCCTCCAGGCTGCCGAGGAGAGCTATGGTTGCGCGGACCAACAATCATGAAAGGTTATGTGGGAGATGAAGATGCCACTGCTCAAACATTAGATTCAGAGGGATGGTTGAAGACTGGGGATCTTTGTTATTTTGATTCTGATGGTTTTCTCTACATTGTGGATAGACTCAAGGAATTGATCAAATACAAAGCTTATCAGGTCCCCCCTGCTGAATTGGAAAATATACTTCATAACAATCCTGAAATTGCTGATGCTGCTGTAGTACCGTATCCTGATGAAGAAGCAGGGCAAATTCCAATGGCATTTGTTGTAAGAAAGCCAGGAAGCAGCATCAATGCAGCTGAGGTCATGGAGTTTGTGGCAAAGCAGGTTTCACCATACAAGAAGATACGACGTGTTTCTTTTATTAACTCTATACCAAAATCTCCGGCTGGTAAAATTTTGAGAAGACAATTGGTTGATCTTGCTCTAACAAGTGGTTCTTCCAAGTTGTGA 1689 0.5121 MANSQTRPNSTTVDPNSGFNPHSRTFHSLRPNVPLPPPSQPLSITEYALSLIPSAATSTDGATTALIDAAADIRLSYPLLLRRIKSLSISLQSFTPLKKGHVALILTPPSVHVPVLYFSLLSLGIVISPANPLSSPAELTHLIQLVNPKIAFTTSETAAKIPKLPLGTILLDSPEFLSMLENKESVTSELERVEVSQSEPAAILFSSGTTGRVKGVLLTHGNLIALIGGFCHLKHMTAAPEESPEEENWVALVTVPLFHVFGFFMLIRGLAMGETMVLMERFDFEGMLRAVEKYKVNYMPVSPPLVVALTKSEVAKKYDLSSLRLLGSGGAPLGKEVAENFGAKFPNVEIVEGYGLTESSGGAARMIGPDEAKRHGSVGRLAEQMEAKIVDPITGESLPPGCRGELWLRGPTIMKGYVGDEDATAQTLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELENILHNNPEIADAAVVPYPDEEAGQIPMAFVVRKPGSSINAAEVMEFVAKQVSPYKKIRRVSFINSIPKSPAGKILRRQLVDLALTSGSSKL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02828 562 Gene3D - 456 556 IPR045851 -
Adu08g02828 562 SUPERFAMILY Acetyl-CoA synthetase-like 60 555 - -
Adu08g02828 562 Pfam AMP-binding enzyme 62 460 IPR000873 -
Adu08g02828 562 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 26 551 - -
Adu08g02828 562 MobiDBLite consensus disorder prediction 1 32 - -
Adu08g02828 562 MobiDBLite consensus disorder prediction 1 27 - -
Adu08g02828 562 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Adu08g02828 562 CDD 4CL 49 550 - -
Adu08g02828 562 Pfam AMP-binding enzyme C-terminal domain 469 544 IPR025110 -
Adu08g02828 562 Gene3D - 39 455 IPR042099 -
Adu08g02828 562 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 26 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02828 Adu-Chr8 44842977 44848550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02828 9 562 Monolignol Biosynthesis Gene Families AT5G63380 59.964 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02828 K01904 - gmx:100804044 807.749