Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02826 ATGGTTGATTTGGAAATCCAGGTCCCGACCCCCTTCGACCCTTTCGCCGAGGCCAAAGAATCGGATGCCCCCGGGGCAAAGGAGTATGTCCATATCCGCATCCAGCAAAGGAATGGGAAGAAGAGCCTGACCACAGTGCAAGGGCTGAAGAAGGAGTTCAGCTACGAGAAAATCCTCAAAGACCTTAAGAAAGAGTTCTGCTGCAACGGCAATGTCGTTCAGGACAAAGAGCTTGGCAAAATAATACAGCTTCAAGGGGATCAGCGCAAGAACGTTTCTCAGTTTCTGGTTCAGGTTGGTCTGGTGAGGAAGGACCAAATCAAGATTCATGGTTTTTGA 339 0.4926 MVDLEIQVPTPFDPFAEAKESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQVGLVRKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02826 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Adu08g02826 112 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Adu08g02826 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Adu08g02826 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - -
Adu08g02826 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Adu08g02826 112 Gene3D - 1 112 - -
Adu08g02826 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Adu08g02826 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Adu08g02826 112 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02826 Adu-Chr8 44834913 44836712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02826 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 84.821 8.38e-70 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02826 K03113 - gmx:100791423 219.55