Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02823 ATGGCTTCTTCTACTTCTTTTGCTTCTCTCTTACTCCCTCTTTACAACCCCGCTTTCCGACCAAAACCAACAACTTCTCTTCCCGCTTTTCGCTCCATTCACTCTTCTGTGCTCCCAGCTACTGATGGATCTCAAGCACCCCACAAGAGAACAAGAAGAATGGAAGGTCCTCGGAAAAGCATGGAAGATTCAGTTCAGCGCAAAATGGAGCAGTTTTATGAAGGGAAAGATGGGCCACCTCTCCGTGTTCTTCCGATTGGTGGGCTGGGTGAAATTGGGATGAACTGCATGCTGGTTGGGAACCATGATCGCTATATCCTCATTGATGCCGGAGTTATGTTTCCAGACTATGATGAACTTGGAGTCCAAAAGATCATACCTGATACAACATTTATAAGAAAATGGAGCCACAAAATTGAAGCACTTGTTATAACACATGGTCATGAGGATCACATTGGAGCGTTGCCTTGGGTCATTCCAGCATTGGATTCCAATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATAAAAAAACGTCTGAAGGAGCATGGTATTTTTCTTCCATCTAGACTCAAGATATTTAGAACAAGAAAGAAGTTTATGGCTGGGCCATTCGAGATAGAACCTATCAGGGTGACCCATTCTATTCCTGATTGTTGTGGATTGGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATCGACGAGACACCTCTGGACGGGAAAGTTTTTGATCGCGAGGCTTTAGAGGAACTCTCTAAAGAAGGAGTAACACTGATGATGAGTGATTCAACCAATGTACTCTCACCTGGAAGGACAATAAGTGAATCTGTTGTTAAAGATGCATTATTGAGGCATATTTCAGCTTCTAAAGGAAGGGTTATTACCACCCAATTTGCATCAAATCTGCATCGACTTGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCCGAAAGTTGGTATTCGTTGGCATGTCTTTGAGGACATATTTAGATGCAGCTTGGAAGGATGGAAAGGCTCCAATTGATCCCTCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGATCTCAAGCAGAACCACGTGCTGCCTTGAATCTTGCATCATATGGAAGTAGTCATGCTTTCAAACTAACTAAGGAAGATATTGTTTTGTATTCGGCCAAGGTTATCCCTGGTAATGAGTCGAATTGGCAAGTATTTCTTTTCTCTGTTTTTATTCACTTTTATCATTATTATTTTATGTTCTCATCCTTGTCTGTTCAATGTTTCTCCAAAAGAACAGTAATTGAGGAAGTACTTCGAATTGTGAAGCCGCAACATTTTCTTCCCATACATGGAGAACTCTTGTTCTTGAAGGAGCATGAATTACTTGGAAAATCAAATGGCATTCGGCACACTGCTGTTATTAAAAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGGAGAGTCCTTTCTAATGGTTTCATTTCCCTTGGAAGAGAGAATTTACAGTTGAAGTACAGTGATGGCGACAAAGCATTTGGTACATCAAGCGACCTCTTCATTGATGAAAGATTGAAAATTGCATTAGATGGCATCATCGTGGTTAGCATGGAAGTTTTTCGCCCCCAAAGAGCAGAGAGTTTGGCTGAAAACACCTTAAATGGGAAGATAAGGATTACGACAAGATGCCTATGGCTTGACAAGGGAAAGTTATTGGATGCACTGCATAAAGCTGCTCATGCTGCTCTTTCAAGCTGCCCTGTAAAGTGTCCACTGGCTCACATGGAAAGAACTGTGGCCGAGGTCTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCTGAAGTTATTGTTATTGCCATAGAAAATCCAGCTGCTGTTCTTGCTGAGGAGATAAACACAAAGTTATCTGGCAAATCACATGTGGATCATGGAACATCAACATTAAGAAAAATAGTCGATGGGCACGGGAAGGAAAATCAGCCAGACACAACGCAAATAAGAGTTAATGCAGCTGATGCCAATGATGTTGAAGGACTTCTACCTGAGGAAGACACTGGTCCACCAACCGAAGAAGCCGAGGGTGATTTATCGGATTCAGAGGAATTTTGGAAGCCATTTATTGCATCCTCACCAGTTGAGAAGTCAATCAAAGCTAACAACGGTTATGTTCCACGAAAGGAGCACAAGTCTAATATTAAGAAAGATGATTCCGAAGACATTGGTGAAGCCAACTTTGTGAAAGCATCCAGTTCTGAACTCAAGTCGTCGAAGTCAGGGAAGAGGAATAAATGGAAACCTGAAGAAATTAAGAAGTTGATTAACATGCGCGGGAAACTACACGATAGATTTCAAATTGTGAAGGGAAGGATGGCTTTATGGGAAGAGATATCTCAGAGCTTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAGTGTAAATCGCTTTGGACATCTTTGGTACAGAAATATCAGGAGACCAAGAACGAGAAGGGTAGTAGCAAGAGCAGTTGGCAATATCTTGAGGACATGGAAAAGATAATGCCTGATAGTGAAGCAATGGCAACAAAATGA 2622 0.4203 MASSTSFASLLLPLYNPAFRPKPTTSLPAFRSIHSSVLPATDGSQAPHKRTRRMEGPRKSMEDSVQRKMEQFYEGKDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFLPSRLKIFRTRKKFMAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTISESVVKDALLRHISASKGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDIVLYSAKVIPGNESNWQVFLFSVFIHFYHYYFMFSSLSVQCFSKRTVIEEVLRIVKPQHFLPIHGELLFLKEHELLGKSNGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGRENLQLKYSDGDKAFGTSSDLFIDERLKIALDGIIVVSMEVFRPQRAESLAENTLNGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVKCPLAHMERTVAEVLRKMVRKYSGKRPEVIVIAIENPAAVLAEEINTKLSGKSHVDHGTSTLRKIVDGHGKENQPDTTQIRVNAADANDVEGLLPEEDTGPPTEEAEGDLSDSEEFWKPFIASSPVEKSIKANNGYVPRKEHKSNIKKDDSEDIGEANFVKASSSELKSSKSGKRNKWKPEEIKKLINMRGKLHDRFQIVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLVQKYQETKNEKGSSKSSWQYLEDMEKIMPDSEAMATK 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02823 873 MobiDBLite consensus disorder prediction 687 715 - -
Adu08g02823 873 Pfam Beta-lactamase superfamily domain 104 240 IPR001279 -
Adu08g02823 873 Gene3D - 85 496 IPR036866 -
Adu08g02823 873 SUPERFAMILY Metallo-hydrolase/oxidoreductase 81 494 IPR036866 -
Adu08g02823 873 MobiDBLite consensus disorder prediction 46 64 - -
Adu08g02823 873 SMART Lactamase_B_5a 93 293 IPR001279 -
Adu08g02823 873 MobiDBLite consensus disorder prediction 737 754 - -
Adu08g02823 873 MobiDBLite consensus disorder prediction 38 64 - -
Adu08g02823 873 Gene3D - 282 431 IPR042173 -
Adu08g02823 873 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 11 873 - -
Adu08g02823 873 MobiDBLite consensus disorder prediction 735 754 - -
Adu08g02823 873 PANTHER RIBONUCLEASE J 11 873 - -
Adu08g02823 873 Pfam Myb/SANT-like DNA-binding domain 778 863 IPR044822 -
Adu08g02823 873 ProSiteProfiles Myb-like domain profile. 773 837 IPR001005 -
Adu08g02823 873 CDD GT1 779 844 - -
Adu08g02823 873 CDD RNaseJ_MBL-fold 84 271 - -
Adu08g02823 873 Gene3D - 781 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02823 Adu-Chr8 44796519 44803446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02823 780 863 Trihelix Transcription Factor Family AT2G38250 34.118 4.30e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu08g02823 Lactamase_B_2 9.1e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02823 - - gmx:100783850 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02823 08 44796519 44803446 Adu08g02823 08 44796519 44803446 ECH
Adu01g01673 01 55644914 55653407 Adu08g02823 08 44796519 44803446 PCT