Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02806 ATGGGAAACCAAAATAGTACTCAACAACATCAAATAGAGATTGAAAACTTATGGTCTTTTCAACGTCGCGAGGTGGAACAGGCTCACGACTTTAAAAATGGCCTGTTCCCCCTCGCCCGTGTTAGGAAGATGATGAAGGTCGAAGAAGACGTTGACCGGATCTCGGCCGAGGTGCCGGTTGTCTTGGCCAAGGCATGTGATCTCTTCATCCGTAATGTCACCCTCCAATCATGGCACCAAGCTCAGAAAAATAAGCGTTCTATCATCCAACGCCAAGACATCAACTCCACCATGGATTCCTTCAGGGATGCTTGCCATAACATTGAATATTTTAAAAGATTAATGAGCGAAGCTTAG 357 0.4538 MGNQNSTQQHQIEIENLWSFQRREVEQAHDFKNGLFPLARVRKMMKVEEDVDRISAEVPVVLAKACDLFIRNVTLQSWHQAQKNKRSIIQRQDINSTMDSFRDACHNIEYFKRLMSEA 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02806 118 Gene3D Histone, subunit A 1 103 IPR009072 GO:0046982
Adu08g02806 118 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 96 IPR003958 -
Adu08g02806 118 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 4 97 IPR027170 GO:0003700|GO:0006355|GO:0016602
Adu08g02806 118 SUPERFAMILY Histone-fold 14 100 IPR009072 GO:0046982
Adu08g02806 118 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02806 Adu-Chr8 44635097 44635453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02806 17 98 CCAAT-HAP5 Transcription Factor Family AT5G63470 51.220 7.48e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Adu08g02806 CBFD_NFYB_HMF 3.2e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02806 - K08066 adu:107463451 229.95