Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02805 ATGGGAAACCAAAATAATACTCAACAACATCAAATAGAGATTGAAAACTTATGGTCCTTTCAACGTCGCGAGGTGGAACAGGCCCACGATTTTAAAAATGGCCTGTTCCCCCTCGCCCGTGTTAGGAAGATGATGAAGGTCGAAGAAGACGTTGACCGGATCTCAGCCGAGGTGCCGGTTGTCTTGGCCAAGGCATGTGATCTCTTCATTCGTAATGTCACCCTCCAATCATGGCACCAAGCTCAGGAAAATAAGCGTTCTATCATCCAACGCCAAGACATCAACTCCACCATGGATTCCTTTAGGGATGCTTACCATAACATTGAATATTTTAAGAGATTAATGAGCGCATCTTAG 357 0.4482 MGNQNNTQQHQIEIENLWSFQRREVEQAHDFKNGLFPLARVRKMMKVEEDVDRISAEVPVVLAKACDLFIRNVTLQSWHQAQENKRSIIQRQDINSTMDSFRDAYHNIEYFKRLMSAS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02805 118 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 97 - -
Adu08g02805 118 Gene3D Histone, subunit A 1 106 IPR009072 GO:0046982
Adu08g02805 118 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 96 IPR003958 -
Adu08g02805 118 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 4 97 IPR027170 GO:0003700|GO:0006355|GO:0016602
Adu08g02805 118 SUPERFAMILY Histone-fold 11 100 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02805 Adu-Chr8 44622843 44623199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02805 17 98 CCAAT-HAP5 Transcription Factor Family AT5G63470 52.439 1.38e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Adu08g02805 CBFD_NFYB_HMF 3.5e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02805 - K08066 adu:107463451 239.965