Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02779 ATGATGAGCAAGAAGATGAGGTTTGTTAAGAAGAACAAGAATGGAGTGAGATTATTGCCACCTGGATTTAGGTTCCAACCAACAGAAGAGGAGCTTCTATTTCAGTATTTGAAATGCAAGGTTTTCTCTTTTCAGTTGCCAGCTTCAATCATTCCTGAGATCAATGTATGCAACTATGATCCTTGGGATTTGCCAGGGAATAATAATAATTATGGGGAGGAAGAAGAGAGATACTTGTTCAGCTCAAAGGAAGTTAAGTATAGAAACGGTAACCGAATGAACAGAATAACGAAATCTGGATATTGGAAAGCAACTGGATCAGACAAAAGAATAATTTCAACATCATCCAATAATAATAATAATAATAATATTGTTGGGATAAGAAAAACTCTTGTATTCTATCATGGAAAATCTCCAAATGGCTCTAGAACTCATTGGATCATGCGTGAGTATCGACTTGTCACTACTCCTTCTAATTCATCCCAGAAGTATGTAGAAGACTTAGGGAATTGGGTTCTTTGCCGCATATTCAAGAAGAAAAGAAGCATAGAAAGTCAACATCACATGGTCAAGAACAAAATTAATAATAATGTTGTCGAGGTGGCTAATAATAATAATAATAAGCCAATATTCTTTGATTTTATGAGGCTATATGACTCGCCAATATCTTCTTCTTCATCTTCATCTTCTTCTTGTTTAAGTTCTGATTTCATAACTCAAATGTAA 726 0.3444 MMSKKMRFVKKNKNGVRLLPPGFRFQPTEEELLFQYLKCKVFSFQLPASIIPEINVCNYDPWDLPGNNNNYGEEEERYLFSSKEVKYRNGNRMNRITKSGYWKATGSDKRIISTSSNNNNNNNIVGIRKTLVFYHGKSPNGSRTHWIMREYRLVTTPSNSSQKYVEDLGNWVLCRIFKKKRSIESQHHMVKNKINNNVVEVANNNNNKPIFFDFMRLYDSPISSSSSSSSSCLSSDFITQM 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02779 241 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 238 - -
Adu08g02779 241 MobiDBLite consensus disorder prediction 222 241 - -
Adu08g02779 241 Gene3D NAC domain 28 184 IPR036093 GO:0003677|GO:0006355
Adu08g02779 241 ProSiteProfiles NAC domain profile. 19 179 IPR003441 GO:0003677|GO:0006355
Adu08g02779 241 SUPERFAMILY NAC domain 17 179 IPR036093 GO:0003677|GO:0006355
Adu08g02779 241 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 6 238 - -
Adu08g02779 241 Pfam No apical meristem (NAM) protein 20 153 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02779 Adu-Chr8 44341176 44343124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02779 9 216 NAC Transcription Factor Family AT5G13180 53.394 1.87e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu08g02779 NAM 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02779 - - aprc:113868555 279.256