Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02773 ATGGCTGCTTTTTCTTCATACCAATATCACCCTAATTTTCTTCCTCTTGACTCTACATTCTTCCAAAACCTAAACACAACAACAACAACTAGTGTTCCTATTCCCCAATCAATTCTTCATCATCATCAAGAAGAAGGGTTCTCTGATTTCAATAATAATACTATAAGCTGTGTTGATCAAATAAGCTCTTGCAACAAGGTTTCATTCATAAGTAATAGTGACAATGAGCCTTCAAATGTTTCTGTCACTACAAGAAACAACCTTAGTCCTCAATCTTCCATGGTAGTTGATAAGCTTGAAATTGGTGAACAAGTTACTCAAAAGGTCACTACTATGGAGAGGAAGAGAAGAACTAGACATGGATCTTCTCCCATCACTACTAATCCCCAATCTAAGGTTTTTTTTTTAATTTTATTTTTATGCTACTTTTGTGTTTTAATTTTAGTGTTGCGCTTTGTGAGAAGAGAGAAAATAAGTGAAAGGATGAAGATGTTGCAGCGGCTTGTGCCAGGCTGTGATAAGGTGACTGGGAAGGCCCTTATGTTGGATGAAATAATCAATTATGTTCAATCTTTACAGAATCAAGTAGAGTTCTTGTCTTTGAAGCTTGCTTCGGTGAGTCCCATTTTCTATGACATGGCAACAGATCTAGACACTACTCTCttggttagacctgagAAATTAAACATCCAAAATTGCAGCAGCTCTAACATCCAACAAACCACCAAAACCAGCACCCTACCTGCCGCCGTTGCCGCCGCCACCACCGCCACCGTCTTCCCCACCGCTAATGATCACTATCTCTTGGATAGTAATTCAGCTTCAGCTTTTCTTCAAGCCCAGAAATCAAATGTCTTCTCCATGGAGAACGGTAGTCAATTCTGGGACACAGAAGAGCAAAGACAAAAATTTCTTCATCCATATGAATTCATCAACAACAACAACTTATGTTCCTTTCATTAG 963 0.3811 MAAFSSYQYHPNFLPLDSTFFQNLNTTTTTSVPIPQSILHHHQEEGFSDFNNNTISCVDQISSCNKVSFISNSDNEPSNVSVTTRNNLSPQSSMVVDKLEIGEQVTQKVTTMERKRRTRHGSSPITTNPQSKVFFLILFLCYFCVLILVLRFVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSLKLASVSPIFYDMATDLDTTLLVRPEKLNIQNCSSSNIQQTTKTSTLPAAVAAATTATVFPTANDHYLLDSNSASAFLQAQKSNVFSMENGSQFWDTEEQRQKFLHPYEFINNNNLCSFH 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02773 320 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 132 IPR024097 GO:0006355
Adu08g02773 320 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 153 320 IPR024097 GO:0006355
Adu08g02773 320 Gene3D - 153 207 IPR036638 GO:0046983
Adu08g02773 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 192 IPR011598 GO:0046983
Adu08g02773 320 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 1 132 - -
Adu08g02773 320 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 153 320 - -
Adu08g02773 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 206 IPR036638 GO:0046983
Adu08g02773 320 SMART finulus 147 198 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02773 Adu-Chr8 44264202 44266792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02773 153 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 52.713 5.23e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02773 - - ahf:112708119 322.783