Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02764 ATGATGTCGTCGTCTTGGGCATCAATGGAAGCTGAGACAGAACACCAACAACAAACCCACAACGACCGTGATTTCACTTCCTTATGTTCTTTCAACAATAACTTGCCTTTCATGGAGGTTGATGATGTCAATGACATCATGATGATGATGACGATGATGAGAGACATGTCTAACTTCTTCCCTGAACCAGACACCACCAACAACAACAACCTCGTACTCCTTCATCATCACTCATCATCATCTTCTTCTTCTTCTTCTTCGTCATCACACCTTCAATGCTTTCTCCCTCCTCCTCCTCCACCAAACCCATTTGACATGCCTACCATGGCTTCCTTCCTTGACCCTCATCAAGCTTCCATAACCGCCACTACTGATTTTGGAGGTTTTCATCATCACAACTTGGAGGAACTAGGTTCTTGTTCTTCTTCTGGAAAACCCGCACCACCACCACCACCACCATTGTTCTTCAACAGATCCAAGATTTTGAGACCCCTTGATGATTCTCTACCTCCATCTGGAGCACAACCAACTCTGTTTCAGAAGAGAGCAGCACTCAGAAAAAACAACTCCTCATCACAACAACAACAAGGTGGTGTTCTTGGAGAAGATGATAACAATAATAATAAGAATAGTATGAAGAGAAAGGTGATGATGGAGATGGAAGATAATGGAAGCTTTGATGGGTCATCGGCATTCAACTATGATTCCGGCGATGACTTGATTGAAACCAATAACAAGAAGAATAATCAGAAAGGAGGTGGTGGCAAGAATAAGAAAGGGATGCCGGCGAAGAACTTGATGGCGGAGCGGCGTCGCCGGAAGAAGCTCAATGATAGGCTCTACATGCTCAGGTCCGTTGTTCCAAAGATTAGCAAAATGGACAGGGCTTCAATATTAGGAGATGCAATTGAATATCTGAGGGAACTGCTGCAGAGAATCAATGAGCTTCATAATGAATTGGAATCATCATCATCAACTTCAACTAATTCTGGAAGTGGTTCAGTCATGACAGCAGTACCAACAGTAGTAGCCTCATCAAGCTTCTATCCATTGACACCAACTCCACCGTCACTCCCAACCCGCATTAAAGAAGAGATTTGCCCCACTTCACTTCCTAGTCCCAATGCTCAACCTCCTAGGGTTGATGTGAGGTTGAGAGAAGGAAGGGCAGTGAACATTCACATGTTTTGTGGTCGGAAAGCAGGGCTTCTGCTGTCAACAATGAGGGCATTGGACACACTTGGCTTAGACATTCAGCAAGCTGTTATCAGCTGTTTCAATGGTTTTGCTTTGGATATTTTTAGAGCTGAGCAATGCAAAGAAGGTCAAGATGTGCATCCAGAGCAAATCAAGGCAGTGCTCTTGGATACAGCTGGGTACCCTGCCATCATCTAA 1395 0.4437 MMSSSWASMEAETEHQQQTHNDRDFTSLCSFNNNLPFMEVDDVNDIMMMMTMMRDMSNFFPEPDTTNNNNLVLLHHHSSSSSSSSSSSSHLQCFLPPPPPPNPFDMPTMASFLDPHQASITATTDFGGFHHHNLEELGSCSSSGKPAPPPPPPLFFNRSKILRPLDDSLPPSGAQPTLFQKRAALRKNNSSSQQQQGGVLGEDDNNNNKNSMKRKVMMEMEDNGSFDGSSAFNYDSGDDLIETNNKKNNQKGGGGKNKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLRELLQRINELHNELESSSSTSTNSGSGSVMTAVPTVVASSSFYPLTPTPPSLPTRIKEEICPTSLPSPNAQPPRVDVRLREGRAVNIHMFCGRKAGLLLSTMRALDTLGLDIQQAVISCFNGFALDIFRAEQCKEGQDVHPEQIKAVLLDTAGYPAII 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02764 464 MobiDBLite consensus disorder prediction 76 92 - -
Adu08g02764 464 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 75 461 - -
Adu08g02764 464 MobiDBLite consensus disorder prediction 76 102 - -
Adu08g02764 464 Gene3D - 256 325 IPR036638 GO:0046983
Adu08g02764 464 PANTHER BHLH TRANSCRIPTIONAL FACTOR 75 461 - -
Adu08g02764 464 MobiDBLite consensus disorder prediction 184 206 - -
Adu08g02764 464 CDD bHLH_AtAMS_like 263 321 - -
Adu08g02764 464 Pfam Helix-loop-helix DNA-binding domain 267 309 IPR011598 GO:0046983
Adu08g02764 464 CDD ACT_UUR-ACR-like 393 453 - -
Adu08g02764 464 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 260 309 IPR011598 GO:0046983
Adu08g02764 464 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 322 IPR036638 GO:0046983
Adu08g02764 464 MobiDBLite consensus disorder prediction 237 264 - -
Adu08g02764 464 SMART finulus 266 315 IPR011598 GO:0046983
Adu08g02764 464 MobiDBLite consensus disorder prediction 1 21 - -
Adu08g02764 464 MobiDBLite consensus disorder prediction 184 210 - -
Adu08g02764 464 Coils Coil 299 326 - -
Adu08g02764 464 MobiDBLite consensus disorder prediction 137 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02764 Adu-Chr8 44160657 44166521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02764 157 437 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 61.672 6.38e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu08g02764 HLH 3.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02764 - - gmx:100217332 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02764 08 44160657 44166521 Adu08g02764 08 44160657 44166521 ECH
Adu03g02899 03 110105638 110108399 Adu08g02764 08 44160657 44166521 PCT