Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02763 ATGGCATCATCGGAGGCAGCAACAACCATCAAGGTTAATGGTAATTCTCACAACAATAACAACAACAACAACAACTCTTCGGAGCTGAACAACAATGTTCATTCTTCATCTTCTTCCTCCACCTCACCCAAAGACGCGGAAGCTGCACTTTACAGGGAGCTATGGCATGCGTGTGCAGGTCCTCTTGTTACAGTTCCAAGAGAAGGAGAAAGAGTTTTCTATTTCCCTCAGGGACACATAGAACAGGTGGAGGCGTCAACAAATCAGGTGGCTGACCAACACATGCCTGTGTACGATCTTCCTTCCAAGATCCTTTGTCGGGTCATCAACGTGCAGCTCAAGGCGGAGCCCGACACAGATGAGGTGTTTGCCCAGATTACCTTGCTTCCGGAACAAAATCAAGATGAGAATGCGGTCGAGAAAGAACCTCCACTGCCACCACCACCGCGCTTCCATGTACATTCATTCTGTAAGACGCTGACCGCATCTGATACAAGCACCCACGGTGGGTTTTCCGTTCTGAGGCGACATGCTGACGAGTGCCTTCCTCCCCTGGATATGTCAAAGCAGCCGCCTACCCAGGAATTGGTGGCGAAGGATTTGCATGCGAATGAATGGCGATTTAGGCACATATTCCGAGGTCAACCTCGGAGGCACTTGCTTCAAAGTGGCTGGAGTGTTTTTGTTAGCTCCAAGAGGCTAGTTGCTGGGGATGCCTTCATATTCTTAAGAGGTGAGAATGGGGAGCTTCGTGTGGGCGTACGGAGAGCGATGAGACAGCAGGGGAATGTCCCATCCTCGGTTATTTCTAGCCACAGTATGCATCTTGGGGTTCTTGCAACTGCTTGGCATGCCATCTTGACAGGAACCATATTCACTGTTTATTATAAACCGAGGACTAGTCCTGCTGAGTTCATTGTTCCATACGACCAATATATGGAATCTCTAAAGAATAATTACACCATAGGGATGCGGTTTAAAATGAGGTTTGAAGGTGAAGAGGCTCCAGAACAGAGGTTTACTGGTACCATTGTTGGAATAGAAGATGCTGACTCAAAAAGGTGGCCTGAATCAAAATGGAGATGCCTCAAGGTGAGATGGGATGAAACATCTAACATTCCCCGTCCAGAGAGGGTTTCCCCTTGGAAAATAGAGCCTGCTCTTGCTCCTCCAGCTCTGAACCCTCTTTCAATGCCCAGGGCTAAAAGGCCTCGATCTAATGTACCTAATGTACCAATTCAATCATCCCAAGATTCTTCTGTCCTAACTCGAGAAGCATCGTCTAAAGTAAGCGCAGACCCTTCACCAGCAAATGGATTCCCAAGGGTCTTGCAAGGTCAAGAATTCTCGACCTTGCGTGGCAATTTCGCAGAAAGTAACGAGTCCGACACAGCTGAGAAATCTGTTGTTTGGCCACCTGTAGATGATGAGAAAGTTGATGTTGTTTCAATGTCACGGAGGTACGGTTCAGAGAACTGGATGTCAATGGGAAGGCATGACACGTCCTATTCAGATCTTCTTTCAGGTTTTGGGGCCAGCGGAGATCCGTCCCATCCATCCTTGGGAGATCAAATGGGTGGACCTGTGGCCTACTCTGCCAGAAAGCATGTGTTAGATCGCGAAGGCAAACTTAATGTGCATCATCCTTGGCCAGCAATGTCCTCAGGTTTTTCACTAAACCTCTTGGAGCCTAGTACGAAAGAATCTCCACGCGGCAGCGAAACACCTTACCAAGCTCGAGGGAATTTGAGGTACGGCCCATTCAGTGAATATCCGGTCATTCCTGGTCACAAAGTTGAGCATCCACATGGAAAGTTGATGCTGCCACCACCCCCAACTCAATACGAGAGTCCTTGTTCAAGAGACCTTATGTCCAAACCAATGTCAGCGAAAACATATGAGACAGCGAAACCAAAAGAAGGTGACTGTAAGCTATTTGGCATCTCACTTATCAGTAGCCCTACTGCTGCACCGGAGCCTTCTGTATCACATAGAAGTGGGACGACTGAGCCAGCTGGTCAAGCACATCTCAAATCACACCACCAACGCACTTCTGAAAATGATCAGAAAACAGAACAATCAAAGGGCTTGAAATCGGCAGATGGTCAAGTTATTGTTGATGACCATGACAAACCGTCAAAAACTTCCCAGGTGCATCTTAAAGATGGTCAGGCCAAACCACTAAGCAGCTCAGCTAGGAGTTGCACCAAGGTCCACAAGAAGGGGATTGCGCTTGGTAGGTCTGTGGATCTGACAAAGTACAGCAACTATGATGAATTGGTTGCTGAATTGGATCAGCTGTTTGAATTTGGAGGTGAATTAATGTCAACAAGAAAGGATTGGCTTATTGTCTACACTGATAATGAGGGTGACATGATGCTCGTCGGGGACGATCCATGGCAGGAGTTCTGTGCCATGGTTCGCAAAATTTATATCTACCCGAAAGAGGAGATTCAAAAGATGAGCCCAGGTACCTTAAGTTCAAGAAATGAAGAGAATCATTCAGCTAGTGAAGGAACTGAGGCAAAAGAAGTCAAAAGTCAGCTGCACCAGAAGTTAAATTCAGAAAGTGTGGCTACGGTCCACGATAATTAG 2595 0.4717 MASSEAATTIKVNGNSHNNNNNNNNSSELNNNVHSSSSSSTSPKDAEAALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQHMPVYDLPSKILCRVINVQLKAEPDTDEVFAQITLLPEQNQDENAVEKEPPLPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADSKRWPESKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLSMPRAKRPRSNVPNVPIQSSQDSSVLTREASSKVSADPSPANGFPRVLQGQEFSTLRGNFAESNESDTAEKSVVWPPVDDEKVDVVSMSRRYGSENWMSMGRHDTSYSDLLSGFGASGDPSHPSLGDQMGGPVAYSARKHVLDREGKLNVHHPWPAMSSGFSLNLLEPSTKESPRGSETPYQARGNLRYGPFSEYPVIPGHKVEHPHGKLMLPPPPTQYESPCSRDLMSKPMSAKTYETAKPKEGDCKLFGISLISSPTAAPEPSVSHRSGTTEPAGQAHLKSHHQRTSENDQKTEQSKGLKSADGQVIVDDHDKPSKTSQVHLKDGQAKPLSSSARSCTKVHKKGIALGRSVDLTKYSNYDELVAELDQLFEFGGELMSTRKDWLIVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSRNEENHSASEGTEAKEVKSQLHQKLNSESVATVHDN 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02763 864 MobiDBLite consensus disorder prediction 676 695 - -
Adu08g02763 864 SMART B3_2 156 258 IPR003340 GO:0003677
Adu08g02763 864 PANTHER AUXIN RESPONSE FACTOR 2 36 840 - -
Adu08g02763 864 Gene3D - 729 822 - -
Adu08g02763 864 Pfam Auxin response factor 282 364 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu08g02763 864 MobiDBLite consensus disorder prediction 654 733 - -
Adu08g02763 864 MobiDBLite consensus disorder prediction 562 584 - -
Adu08g02763 864 CDD B3_DNA 154 256 IPR003340 GO:0003677
Adu08g02763 864 MobiDBLite consensus disorder prediction 702 717 - -
Adu08g02763 864 MobiDBLite consensus disorder prediction 718 733 - -
Adu08g02763 864 Pfam AUX/IAA family 778 820 IPR033389 -
Adu08g02763 864 Pfam AUX/IAA family 717 769 IPR033389 -
Adu08g02763 864 MobiDBLite consensus disorder prediction 834 850 - -
Adu08g02763 864 MobiDBLite consensus disorder prediction 602 623 - -
Adu08g02763 864 MobiDBLite consensus disorder prediction 390 442 - -
Adu08g02763 864 MobiDBLite consensus disorder prediction 822 864 - -
Adu08g02763 864 ProSiteProfiles PB1 domain profile. 733 815 IPR000270 GO:0005515
Adu08g02763 864 Pfam B3 DNA binding domain 156 257 IPR003340 GO:0003677
Adu08g02763 864 SUPERFAMILY CAD & PB1 domains 733 810 - -
Adu08g02763 864 Gene3D - 319 389 - -
Adu08g02763 864 ProSiteProfiles B3 DNA-binding domain profile. 156 258 IPR003340 GO:0003677
Adu08g02763 864 SUPERFAMILY DNA-binding pseudobarrel domain 152 285 IPR015300 -
Adu08g02763 864 MobiDBLite consensus disorder prediction 408 434 - -
Adu08g02763 864 MobiDBLite consensus disorder prediction 562 576 - -
Adu08g02763 864 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 36 840 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu08g02763 864 MobiDBLite consensus disorder prediction 1 44 - -
Adu08g02763 864 Gene3D - 153 258 IPR015300 -
Adu08g02763 864 MobiDBLite consensus disorder prediction 654 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02763 Adu-Chr8 44153951 44159345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02763 1 855 B3 DNA Binding Superfamily AT5G62000 63.356 0.0 1080
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu08g02763 AUX_IAA 8.2e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02763 - - aip:107612759 1655.96