Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02749 ATGATCCTTCGGAAAGGGAAGGTGATCGCCAAGACATTCGAGATAAGAACCTTCGAGGAAAATGGCACAGCGGATAGAGACGACGCAGTGCCCTCGAAGGTAACTTCTGAGTATGACCCCTCGAAGCACGCGTGGGTAGTTGCGACCACTACTATCGTGCTCCAAACTATTTACTTAGGTCGAGAGTTCGTGGAAGAAGAACCCCAATTGCCCGTCGTAACCTTCCTAGATAGGAACGCTTCAGCATCTAGGAAGCGGTCATCTAAGGTGGTACACCTCGAGTCCGACTCCGAGACCGAGGAAGAGGAAATCCGTCAACCCTGGCCAGAAGGAAGACACCATGGAGGAGGATCCAGAGGAGGAGTTGGACCCTTACGGAAGTCCAAAGGTGGAATACATGCCCTCTTCCCCCACTTCGGCACCCCGTCGAGTTTTGGGTTCACCCCACCCAACGGAACCGGATCTTCATTGCACGAAAAGGTGGATCCATCAAGGCATGGAAAGAGGTCAGTTTCATTGGAAGAAGCACAAAAGGAGGAAGAAGAACATCATGAACACTTGTTCCCAATCTATTCTGAAAGATCTCAACAAGACATGTCGGCTATGGTTTCTGTCCTCACACAAGTCATGGGAGGAGGCATCCCAAATGACCCTTTAACCCCTTCTCATCAATCTACTAATCACAATAATCAACAATCTCAACCACCATCACAAGATCAAGGGAACATAAGAAGAAGACATTATAGAGGGGTGAGACAACGGCCATGGGGAAAATGGGCGGCGGAGATTCGAGATCCACAAAAGGCGGCTAGGGTATGGCTTGGAACTTTTGAAACTGCCGAGGCGGCTGCCCTCGCATACGACGAGGCAGCCCTTAGATTCAAAGGAAGCAAAGCTAAACTTAATTTTCCTGAAAGAGTTCAAGGAACTGTCGAATTTGGTAATTACCTCACGAATTTTCAACAAAATAATAACCAACATCAAATTCAACATCAGAATACAGCAACTCAACAAAATGTTCAATATCCATCACAAGGGATAATGACAAGTAGTGGCGGATTCGGTTATGATCAACAGAACATGTATTTTGTTCCGTCTCATCATCAACACTATTCATCATCTTCTTCTTCGTCTTCCGAACCACCACATCAACATTATAACCAACAACAAGAACTTATGAGATCATATTCATTGCAATATGGAGGTTCTTCTTCTTCTAGTGATCATCATTATCATCATCAGCAATATCCTACTAAGAATTGGAATGATGATGACATGGATGGTAGACAATAA 1293 0.4532 MILRKGKVIAKTFEIRTFEENGTADRDDAVPSKVTSEYDPSKHAWVVATTTIVLQTIYLGREFVEEEPQLPVVTFLDRNASASRKRSSKVVHLESDSETEEEEIRQPWPEGRHHGGGSRGGVGPLRKSKGGIHALFPHFGTPSSFGFTPPNGTGSSLHEKVDPSRHGKRSVSLEEAQKEEEEHHEHLFPIYSERSQQDMSAMVSVLTQVMGGGIPNDPLTPSHQSTNHNNQQSQPPSQDQGNIRRRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERVQGTVEFGNYLTNFQQNNNQHQIQHQNTATQQNVQYPSQGIMTSSGGFGYDQQNMYFVPSHHQHYSSSSSSSSEPPHQHYNQQQELMRSYSLQYGGSSSSSDHHYHHQQYPTKNWNDDDMDGRQ 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02749 430 MobiDBLite consensus disorder prediction 159 184 - -
Adu08g02749 430 CDD AP2 247 305 IPR001471 GO:0003700|GO:0006355
Adu08g02749 430 MobiDBLite consensus disorder prediction 412 430 - -
Adu08g02749 430 MobiDBLite consensus disorder prediction 144 158 - -
Adu08g02749 430 MobiDBLite consensus disorder prediction 367 411 - -
Adu08g02749 430 MobiDBLite consensus disorder prediction 210 243 - -
Adu08g02749 430 MobiDBLite consensus disorder prediction 143 184 - -
Adu08g02749 430 MobiDBLite consensus disorder prediction 218 241 - -
Adu08g02749 430 MobiDBLite consensus disorder prediction 86 112 - -
Adu08g02749 430 Gene3D AP2/ERF domain 246 306 IPR036955 GO:0003700|GO:0006355
Adu08g02749 430 PANTHER DNA-BINDING DOMAIN 113 416 IPR044808 GO:0003700|GO:0009873
Adu08g02749 430 SMART rav1_2 247 310 IPR001471 GO:0003700|GO:0006355
Adu08g02749 430 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 113 416 - -
Adu08g02749 430 MobiDBLite consensus disorder prediction 86 129 - -
Adu08g02749 430 MobiDBLite consensus disorder prediction 367 430 - -
Adu08g02749 430 ProSiteProfiles AP2/ERF domain profile. 247 304 IPR001471 GO:0003700|GO:0006355
Adu08g02749 430 Pfam AP2 domain 247 296 IPR001471 GO:0003700|GO:0006355
Adu08g02749 430 PRINTS Ethylene responsive element binding protein signature 248 259 IPR001471 GO:0003700|GO:0006355
Adu08g02749 430 PRINTS Ethylene responsive element binding protein signature 270 286 IPR001471 GO:0003700|GO:0006355
Adu08g02749 430 SUPERFAMILY DNA-binding domain 247 305 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02749 Adu-Chr8 43929659 43935427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02749 186 308 AP2-EREBP Transcription Factor Family AT5G61890 69.466 1.65e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu08g02749 AP2 4.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02749 - - adu:107463444 684.485