Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02748 ATGGACCCTGCTGACGCATTCACAACAAGCCTCTTCAAGTGGGACCCACGCACGGTCCTTCCTCCTCCTCCTTCCTCTGCCACTCGTCCGCCGCCTCAGATCCTTGACTACACGGTTGCTCCCCCTGCTGTCTCCCCTTCTTCGGTGTCCTTCCCGCCACCCAAGAGACTCGACCTAGGAGGCCTCGAAGAGCTTTTACAAGCCTACGGTATACGCTATTACACGGCGGCAAAGATGGCAGAGCTAGGGTTCACGGTGAGGACTCTTATTGACATGAAAGACGATGAGATCGACGATATGATGAATAGCCTCTCTCAGATCTTCCGATGGGACCTTCTCGTCGGTGAGAGGTATGGTGTTAAGGCTGCCGTTAGAGCTGAGCGGCGTCGTCTCGAGGAGGAGGAGCTTATCAAACGCCGTAACTTCCTCTGCACCACTGATACCACCACCAACGCCCTTGACGCTCTTTCTCAAGAAGGTTTATCAGAGGAACCAGTGGTGCAACAAGAGAAAGAGGCTGCTGGAAGCGGGGGAGGGAGTACGTGGGAGGTGGTAGGCGGCGGAGAAGAGAGGAGGAAGCAGGTGCAGCAAGAAAGGAGGAGGAGAAGAAGCAACAAGATAAATAACAAGGGAATTAATAGAAGCAACAACGAGGATGGTGAAGAGGAAGAGTTAGAAGGAGAAGAGAACGACATGATTGAAGGGAGCAACGGCGGCAACGGCGGAGAAAGGCAAAGAGAGCACCCCTTCATAGTGACGGAGCCTGGGGAAGTGGCACGTGGCAAGAAGAATGGATTAGACTACCTTTTTCATCTCTATGAACAATGCCGTGAGTTCTTGATCCAAGTTCAAGCCATTGCTAAGGACCGTGGTGAAAAATGCCCCACCAAGGTAACAAATCAAGTATTCAGGTATGCAAAGAAAGCAGGTGCAAGCTACATTAACAAGCCAAAGATGAGGCACTACGTCCATTGCTATGCCCTACACTGCCTCGACGAGGACGCGTCTAACGAGCTCCGACGAACCTTCAAGGAGAGGGGCGAGAACGTGGGCGCCTGGAGGCAAGCGTGCTACAAGCCTCTAGTTGCGATAGCTGCTCGTCAGGGTTGGGACATTGATGCCATCTTCAATGCTCATCCTCGCCTTTCCATTTGGTATGTTCCTACTAAGCTCCGCCAACTTTGTCATGCTGAGAGTAACAACGTGGTCGCCACCGTAGCAGTCTCTACCTCTGTTTCGCCAGCAGTTGCCCAACTTCCTTTTTAA 1266 0.5245 MDPADAFTTSLFKWDPRTVLPPPPSSATRPPPQILDYTVAPPAVSPSSVSFPPPKRLDLGGLEELLQAYGIRYYTAAKMAELGFTVRTLIDMKDDEIDDMMNSLSQIFRWDLLVGERYGVKAAVRAERRRLEEEELIKRRNFLCTTDTTTNALDALSQEGLSEEPVVQQEKEAAGSGGGSTWEVVGGGEERRKQVQQERRRRRSNKINNKGINRSNNEDGEEEELEGEENDMIEGSNGGNGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDASNELRRTFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAESNNVVATVAVSTSVSPAVAQLPF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02748 421 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 237 401 IPR035209 GO:0003677
Adu08g02748 421 Pfam Floricaula / Leafy protein SAM domain 59 135 IPR035079 -
Adu08g02748 421 MobiDBLite consensus disorder prediction 158 246 - -
Adu08g02748 421 MobiDBLite consensus disorder prediction 1 34 - -
Adu08g02748 421 Gene3D Protein LEAFY 240 409 IPR038276 -
Adu08g02748 421 PANTHER PROTEIN LEAFY 1 410 IPR002910 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02748 Adu-Chr8 43911826 43915080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02748 1 401 Orphan Transcription Factor Family AT5G61850 60.432 2.07e-154 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Adu08g02748 C_LFY_FLO 1e-108 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02748 - - gmx:100798196 535.028