Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02739 ATGAGGCCTGTTTTTGCTGGGAATTTGGAGTATGATACACGACAATCGGAGCTGGAGCGATTGTTCTCAAAGTATGGAAGAATTGACCGCGTTGACATGAAATCTGGTTTTGCTTTTGTCTATTATGAGGATGAGCGTGATGCTGAAGAAGCAATTCGTGCACTTGACAATTTTCCATTTGGCTATGAAAAGCGAAGGCTCTCTGTTGAATGGGCTAGGGGTGAACGTGGGCGTCATCGTGATGGCTCAAGGGCAAACCAGAAGCCGACAAAAACCCTATTTGTGATCAACTTTGACCCAATTCGTACTAGAGTTCGGGATATAGAAAAGCACTTTGAACCTTATGGGAAGGTTCTTCATGTTCGAATTCGTAGGAACTTCGCATTTGTGCAGTTTGAAACACAAGAAGATGCTACGAAAGCTCTTGAGTGTACAAATATGAGTAAGATACTGGACAGGGTGGTGTCTGTGGAGTATGCACTGAGGGATGATGGTGATAGGGGTGACAATTATGACAGTCCGAGACGAGGTGGTTATGACAGATCACCGAGTCCGGCCTATCGCAGGCGGCCAAGTCCTGACTACGGTCATCCACGCAGCCCTGTGTATGATAGATATAATGGACCAGACAGGCGTAGGAGTCCTGATTACGGCAGGCAGAGGAGCCCAGATTATGGCAGATACCGCAGCCGTTCACCAGTTCGAAGGTCAAGGACTTAG 720 0.4722 MRPVFAGNLEYDTRQSELERLFSKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNFPFGYEKRRLSVEWARGERGRHRDGSRANQKPTKTLFVINFDPIRTRVRDIEKHFEPYGKVLHVRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDGDRGDNYDSPRRGGYDRSPSPAYRRRPSPDYGHPRSPVYDRYNGPDRRRSPDYGRQRSPDYGRYRSRSPVRRSRT 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02739 239 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR RS31-RELATED 5 201 IPR029537 GO:0000398|GO:0005681
Adu08g02739 239 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 74 IPR000504 GO:0003723
Adu08g02739 239 MobiDBLite consensus disorder prediction 163 239 - -
Adu08g02739 239 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 60 IPR000504 GO:0003723
Adu08g02739 239 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 155 IPR000504 GO:0003723
Adu08g02739 239 Gene3D - 1 81 IPR012677 -
Adu08g02739 239 Gene3D - 82 173 IPR012677 -
Adu08g02739 239 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 162 IPR000504 GO:0003723
Adu08g02739 239 SUPERFAMILY RNA-binding domain, RBD 2 162 IPR035979 GO:0003676
Adu08g02739 239 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 5 201 - -
Adu08g02739 239 MobiDBLite consensus disorder prediction 204 231 - -
Adu08g02739 239 SMART rrm1_1 3 70 IPR000504 GO:0003723
Adu08g02739 239 SMART rrm1_1 92 158 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02739 Adu-Chr8 43839260 43842119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02739 4 164 Eukaryotic Initiation Factors Gene Family AT1G49760 24.176 3.09e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02739 K12893 - gmx:100797709 422.165