Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02726 ATGGGAAGAGCTCCTTGTTGTTCAAAAGTAGGGTTGCATAGAGGTCCATGGACTCCAAGAGAAGACACACTCCTCACTAAGTATATTCAAGCTCATGGAGAAGGACAATGGAAATCACTACCAAAAAAAGCTGGACTTTTAAGATGTGGGAAAAGTTGTAGGCTAAGATGGATGAATTATTTGAGACCAGATATAAAGCGTGGAAACATAACTCCTGAAGAAGATGATCTTATAATAAGAATGCATTCTCTCTTGGGAAACAAATGGTCCCTCATAGCTGGAAGATTGCCGGGAAGAACTGACAACGAGATCAAGAATTATTGGAACACGCATCTAAGCAAGAAGATGAATGATTCGAAGGAGAAGGATGAAAAAGAAGGAGGAGAAACCGTCGCTAAAAAGAAAAATAGGAAGAACAAGAACAATAGTAAGAGAGAAAAGAACAAGAAGAAAAACAAAGGGTCAAAAGAAGAAGAATCACCAAAAACACAAGTTTATTTACCAAAACCTATTAGGGTGAAGCCATCAAATTTGGCTAGAACAAATAGTTCTTCCTTTACTTCTTTTGATTCCAACAATTCGGCATCAACGAGCCAGGAGAAAGAAGAAGATAACAATAACAATAACAATGGCGAGGGCGAGGGCGACGTCACAAAAGCATGGACGGAGGAAACAAACAACTTGGTATTTTTGGGTGAAATTGGTGTGAACAAGAAAAATAATATGGATGAAAATGATGGGTTTGGATTCTATTTTGATGGCCATGAAGACTTGGTCCTCAATAATAATAATTCAGATATGGAGGGTCAATCCTATAATTATTATGGAATGGAGGATCATCTTAATCATCATGGAACATTAGAGAAGCTATATGAAGAGTATTTGCAGGTTTTGAATATGGAAGATAACATGTATGAGTTGGATTCTTTTGCTGAGTCTCTAATGGTGTAA 951 0.3733 MGRAPCCSKVGLHRGPWTPREDTLLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHLSKKMNDSKEKDEKEGGETVAKKKNRKNKNNSKREKNKKKNKGSKEEESPKTQVYLPKPIRVKPSNLARTNSSSFTSFDSNNSASTSQEKEEDNNNNNNGEGEGDVTKAWTEETNNLVFLGEIGVNKKNNMDENDGFGFYFDGHEDLVLNNNNSDMEGQSYNYYGMEDHLNHHGTLEKLYEEYLQVLNMEDNMYELDSFAESLMV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02726 316 PANTHER MYB TRANSCRIPTION FACTOR 1 302 - -
Adu08g02726 316 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 302 - -
Adu08g02726 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Adu08g02726 316 CDD SANT 16 61 IPR001005 -
Adu08g02726 316 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Adu08g02726 316 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu08g02726 316 MobiDBLite consensus disorder prediction 115 217 - -
Adu08g02726 316 MobiDBLite consensus disorder prediction 176 217 - -
Adu08g02726 316 SMART sant 66 114 IPR001005 -
Adu08g02726 316 SMART sant 13 63 IPR001005 -
Adu08g02726 316 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu08g02726 316 Gene3D - 14 66 - -
Adu08g02726 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu08g02726 316 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu08g02726 316 MobiDBLite consensus disorder prediction 115 136 - -
Adu08g02726 316 CDD SANT 71 112 IPR001005 -
Adu08g02726 316 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu08g02726 316 Gene3D - 71 116 - -
Adu08g02726 316 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02726 Adu-Chr8 43698059 43699571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02726 1 116 MYB Transcription Factor Family AT5G49330 75.000 2.35e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu08g02726 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02726 K09422 - gmx:100803345 337.806