Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02714 ATGAAGTTTGAGGTGGGTTCAGGTGGTTGCGGCGGCGGAGGTGGCGGTGGCGGTAGTGGCGGTTGGAATTGGAATGATAATGAAGAAGAAGAAAAATCTATGGTGATGAAAATTCTCGGAAAATGTGCTTTTGATTACTTGGCTTCAAACTCCTTCATCACCAATGAGAGCATGTTAATGGCAACAGGGAGTTTCGAGAATCTTCAGAACAAGCTCTCTGATCTTGTTGAACGCCCCAACTTGAACAATTTCAGTTGGAACTACGCGATCTTTTGGCAGTTTTCACAGTCCAAATTCAAAAAAGATTGTGTTGTTCTTGGTTGGGGTGATGGCTGTTGCAGAGAACCAATCGAAGGTGAAGAAGAAAGAGAAGCTTTGAGACTTGGATTTGATGATGATGAGGTTGTTCAGAGAATGAGGAAGAGGGTGCTGCAGAAGCTTCACACGGTTTTTAATGGTTCTGAAGAGGAAAATGAAAACTACGCTTTTGGCCTTGACCGTGTAACTGACACTGAGATGTTCTTCCTTGCTTCCATGTACTTCTCTTTTCCCAAAGGTTATGGTGGTCCAGGTAAGTGCTTTGAACTTGGTAAGCACTTATGGATTTGTAATGATGATGATGCTGATGATAGAGATGGTGATCATGGGTTTTTGAATTGTGATTCTGGTTATTGTGTGAGGGCATTTTTGGCAAAATCAGCTGGGATTAAAACTGTTGTTTTGGTTCCAACTGAATTAGGTGTTGTTGAATTAGGTTCTGTGAGGATTGTTGATGAGAACCTTGATTTGTTAAAAGCTGTGTACTCTGTATTTTCTTCTTCTTTTGCTCACTCATCATCATTCAATGATGTTGTAAATGTCAAGGGAGATGAAAAAAACAGATTTTTTTGTGGTTTGGATGTTGGGAATTGGGATAGGGATAGAGATATTAGGGTTAGGGATCATAGAGTTGAGGGTGTTCCGGTTCCAAAGATTTTTGGGAAGGAATTGAATGTTGGGAATTTGAATTCAGGGGGAAAGAATTTTAGGGAGAAAGTTGTTGTTAGGAAAATTGAAGAGAAGAAATCATGGAATGGTTACCCTAATGGGAATAATGGAATTCGGTTTCTTAATAATGCTAGGGATGGTGTTAATGGTTCAAGAAGTTGGGAAGTTAACCAAGGTTTGAGTCAGGGCTGTCTTGGAGGAGTTTTCCCTCCTATTCCTAGGTCCTGCCCTAGATCACAGTCTTTTGGGAGATCAATCGTTGGCGAATGTGAGATTTCAAATAGAGACTCATCACATAAAGAAGAGAAACCGGAAGAAAAACCAAGCACGACTCAAGAAAAAAGGCCGAAAAAGCGAGGTAGGAAGCCTGCCAATGGAAGGGAAGAGCCCCTCAATCATGTGGAGGCGGAGAGGCAAAGGCGCGAGAAACTAAACCAACGTTTCTATGCGTTGCGCGCTGTTGTACCTAATATCTCGAAGATGGATAAGGCATCTTTGTTGGGAGACGCCATAGTTCACATCAATGAGCTACAGGCGAAATTAAAGGCCTTGGAATACGAAAAATCAACCCTGGAAAGTACTTCCAAGGCTAGTTTACCAGGAATTGAGGCCAATCTTCGAGATAGAACTTGTTCTTTCAAGGTGGATATAGAAGCGGATCAAGATGGTGTGATTGTGAAAGTGAGTTGTCCTATTGATCTTCATCCTACATCAAAATTGATCCAAGCGTTAAAAGATTCAAAAATGAGTATTTTGGAGTCCAAATTTAATGCTACAAATGATCATGTTTTCCACACATTCGTGATTAAGTCCCATGCATCGGAACAACTCACAAAAGAAAAGGTGATCGCGGCGATTTCTGGTGAATCCAACTCAAGAAAACTCATATTCGCATAG 1884 0.4124 MKFEVGSGGCGGGGGGGGSGGWNWNDNEEEEKSMVMKILGKCAFDYLASNSFITNESMLMATGSFENLQNKLSDLVERPNLNNFSWNYAIFWQFSQSKFKKDCVVLGWGDGCCREPIEGEEEREALRLGFDDDEVVQRMRKRVLQKLHTVFNGSEEENENYAFGLDRVTDTEMFFLASMYFSFPKGYGGPGKCFELGKHLWICNDDDADDRDGDHGFLNCDSGYCVRAFLAKSAGIKTVVLVPTELGVVELGSVRIVDENLDLLKAVYSVFSSSFAHSSSFNDVVNVKGDEKNRFFCGLDVGNWDRDRDIRVRDHRVEGVPVPKIFGKELNVGNLNSGGKNFREKVVVRKIEEKKSWNGYPNGNNGIRFLNNARDGVNGSRSWEVNQGLSQGCLGGVFPPIPRSCPRSQSFGRSIVGECEISNRDSSHKEEKPEEKPSTTQEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIVHINELQAKLKALEYEKSTLESTSKASLPGIEANLRDRTCSFKVDIEADQDGVIVKVSCPIDLHPTSKLIQALKDSKMSILESKFNATNDHVFHTFVIKSHASEQLTKEKVIAAISGESNSRKLIFA 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02714 627 CDD bHLH_AtAIB_like 454 524 - -
Adu08g02714 627 PANTHER MYC 407 620 IPR045084 GO:0003700|GO:0006355
Adu08g02714 627 MobiDBLite consensus disorder prediction 451 468 - -
Adu08g02714 627 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 457 506 IPR011598 GO:0046983
Adu08g02714 627 MobiDBLite consensus disorder prediction 1 26 - -
Adu08g02714 627 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 460 522 IPR036638 GO:0046983
Adu08g02714 627 PANTHER MYC 28 393 IPR045084 GO:0003700|GO:0006355
Adu08g02714 627 Gene3D - 449 523 IPR036638 GO:0046983
Adu08g02714 627 SMART finulus 463 512 IPR011598 GO:0046983
Adu08g02714 627 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 407 620 - -
Adu08g02714 627 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 28 393 - -
Adu08g02714 627 MobiDBLite consensus disorder prediction 418 468 - -
Adu08g02714 627 Pfam Helix-loop-helix DNA-binding domain 461 507 IPR011598 GO:0046983
Adu08g02714 627 MobiDBLite consensus disorder prediction 422 442 - -
Adu08g02714 627 Coils Coil 503 523 - -
Adu08g02714 627 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 68 271 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02714 Adu-Chr8 43480342 43482317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02714 24 618 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 44.006 1.07e-151 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu08g02714 bHLH-MYC_N 6.2e-49 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02714 - - aip:107623716 1083.55