Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02711 ATGAGCTTAGAATTACTTATTATTTCTGGCGACGAAAGAGATGCACGGAGCTATAGCTACAGCTTGGAAGTAGGAGGAAATGGGCGGAAACTAACCTTCGAGGGAAGTCCTAGAAGCATAAGAGATAGCCACAAGAAAGTTAGAGATAGCCATGACGGCCTCATTGTATACCGAAACATGGCGCTTTTCTTCTCCGGTGGGGACCGGAAAGAGCTGAAGCTGAGAGTAACTGGAAGGATATGGAAAGAACAGCAAAACCCGGAAAGTGGAGTGTGCTTACCAAATCTGTGCAGCTAG 297 0.4646 MSLELLIISGDERDARSYSYSLEVGGNGRKLTFEGSPRSIRDSHKKVRDSHDGLIVYRNMALFFSGGDRKELKLRVTGRIWKEQQNPESGVCLPNLCS 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02711 98 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 5 90 - -
Adu08g02711 98 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 3 77 IPR008974 GO:0005515
Adu08g02711 98 Pfam Seven in absentia protein family 7 77 IPR018121 GO:0005737|GO:0006511|GO:0007275
Adu08g02711 98 PANTHER UBIQUITIN LIGASE SINAT3 5 90 - -
Adu08g02711 98 SUPERFAMILY TRAF domain-like 5 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02711 Adu-Chr8 43415112 43415408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02711 3 84 C3H Transcription Factor Family AT2G41980 67.073 1.54e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02711 K04506 - gmx:100792687 181.415