Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02701 ATGGGAATCCTAATCAAGAAAATCCTTTCTCTTCTCTTCATCTACCCTCTAATATTAGCTTCTGACTGCGAATTTTCTTGGTGTGAAAGCATGCTCATTCGTTTCCCCTTTCAACTACAAAGCAACCAGCTTCAACGTCCTTATTGTGGTTACCCTGGTTTCAAATTAATCTGCACCAATGACGCCAAAACAGTTCTAGATCTTCCATTCTCTGGAGAATTCTATGTACGCAACATAAACTATCTAACACAGCAGATACAAATCTATGACCCTGATCAGTGCCTTCCAAAACGTCTTCTAAGCCTCAATCTTTCGGGTACCCCCTTCATTGCCATGTTGAGTCGCAACTACACTTTCTTAAGCTGCAATTCTCGCAACGCAGCGCCGCGGTCCGTTCCCATTGATTGCCTGAGCAATTCAACATATTTTGTATCTGCTGTGCCTTCAGGGGACTTGGCCAATAATTCATTGCCAGTTTCATGCAAAGTTATTGGAAGGCTTTCAGTTCCATTTTCAAGCACAACGTTTGTGAGGAATCTTGGTGATGATCTCATCCAAGATCTTCAATTAACATGGAATAAACCTGATTGCAGAGTATGTGAATCACAAGGAAAATTGTGTCAATTTGAGAACAATACCAGTGATAGAATTCGTTGCTCCGATGATTACAATACAGGTGGTACATCAAGGGGACTTTTAGCCTTCAGAATAATCACATTATGCATAATTGGACCAGCTTGTATCTTTGCTGTTGTGTTTGCATGCTGTGTGTGCTACAGAGACAGAGTTTCCAATGCTAATGCTGCAAGGAGAGCACTACAATTAGCAGCAATAACACCACATCCTCCTGAACCTCCCATTACCACTACTTTGGGTTTGGACGAAACTACAATTGACTCTTATGAGAAGCTTGTGCTGGGCGAGAGTAAGAGGGTGCCAGGACCCAATAATGGAACATGTTGGATATGCTTGGCAGAGTACAACTCCAAAGAGACCATTAGATGCATCCCTGAATGCAAACATTGCTTCCATTCAGATTGCATTGATGAGTGGCTTAGAATGAATTCAACATGCCCAGTTTGCAGGAACACTCCGATTCCATCTCCTTCTCCCCTTCATGATATCATGTCTAGTAGTGCACCTTGA 1146 0.4232 MGILIKKILSLLFIYPLILASDCEFSWCESMLIRFPFQLQSNQLQRPYCGYPGFKLICTNDAKTVLDLPFSGEFYVRNINYLTQQIQIYDPDQCLPKRLLSLNLSGTPFIAMLSRNYTFLSCNSRNAAPRSVPIDCLSNSTYFVSAVPSGDLANNSLPVSCKVIGRLSVPFSSTTFVRNLGDDLIQDLQLTWNKPDCRVCESQGKLCQFENNTSDRIRCSDDYNTGGTSRGLLAFRIITLCIIGPACIFAVVFACCVCYRDRVSNANAARRALQLAAITPHPPEPPITTTLGLDETTIDSYEKLVLGESKRVPGPNNGTCWICLAEYNSKETIRCIPECKHCFHSDCIDEWLRMNSTCPVCRNTPIPSPSPLHDIMSSSAP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02701 381 Pfam Ring finger domain 319 362 IPR001841 -
Adu08g02701 381 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 366 IPR013083 -
Adu08g02701 381 ProSiteProfiles Zinc finger RING-type profile. 320 362 IPR001841 -
Adu08g02701 381 Pfam Wall-associated receptor kinase galacturonan-binding 23 90 IPR025287 GO:0030247
Adu08g02701 381 PANTHER RING-H2 FINGER PROTEIN ATL21A-RELATED 8 369 - -
Adu08g02701 381 SMART ring_2 320 361 IPR001841 -
Adu08g02701 381 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 8 369 - -
Adu08g02701 381 Pfam Wall-associated receptor kinase C-terminal 145 219 IPR032872 -
Adu08g02701 381 SUPERFAMILY RING/U-box 319 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02701 Adu-Chr8 43298845 43302630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02701 29 374 C3H Transcription Factor Family AT2G25410 42.571 3.34e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02701 - - adu:107463372 757.288