Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02662 ATGGGTAGATCTCCTTGTTGTGAGAAAGAACACACAAACAAAGGAGCTTGGACCAAAGAGGAAGATGAACGCCTCATCAACTACATCAAGATTCATGGTGAAGGTTGTTGGAGATCTCTTCCCAAAGCTGCTGGTTTATTGAGATGTGGAAAGAGTTGCAGATTGAGATGGATAAATTACCTGAGGCCTGATCTAAAGAGAGGAAACTTCACTGAAGAAGAAGATGAACTCATCATCAACCTTCATAGCTTACTTGGAAACAAGTGGTCTTTAATAGCTGCAAGGTTACCCGGAAGAACAGATAACGAAATAAAAAATTATTGGAACACTCACATCAAAAGAAAACTCTACAGCCGGGGAATTGATCCTCAAACTCACCGGCCGCTTAATGCGACCGGAATCACAACCACAGCCACAGTCGCAACCGCAAACAATAAGAAAAGCAAGGAAAAAAACGATAGCATTATTTTAAGCACCAACATTATTAATGACAACAACAATAACAAGTTTCAATTGGTGAGTGAATTGGTTTGTGAAGATTCATCAAATAGTAGCAGTGGTGTTACCATTGAAGAACAAACATACCCTCTTCATAATCATCAAAATAATCATAATAATCATCATCATCGCCAACTCAACTTGGATCTTTCCATTGGTCTTCCCTCTCAACAAAATAACCAAGCTTCTTCAAATTCCATGAACCAAGAAAACAACAAGAAGTTGAAGCAAGAACAAGAAGAAGCACATGGTGTTTTCTATCATCATCCATGGTATGGCAATAGTGATAATACTAATAATAATAGTAAGAGTGTGTGCTTGTGTTATGGTCTAGGGTTTCAAAGTAACAATAACAAAGTGTGTAGCTGCAAAGGTGCCATTGTTGGTGGTACGGCGGTTACTACAACCGCCGCAGATAATAGCTTGTATAGATTTTATAGACCTATGAATATATAG 954 0.3836 MGRSPCCEKEHTNKGAWTKEEDERLINYIKIHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNATGITTTATVATANNKKSKEKNDSIILSTNIINDNNNNKFQLVSELVCEDSSNSSSGVTIEEQTYPLHNHQNNHNNHHHRQLNLDLSIGLPSQQNNQASSNSMNQENNKKLKQEQEEAHGVFYHHPWYGNSDNTNNNSKSVCLCYGLGFQSNNNKVCSCKGAIVGGTAVTTTAADNSLYRFYRPMNI 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02662 317 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Adu08g02662 317 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu08g02662 317 CDD SANT 69 112 IPR001005 -
Adu08g02662 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Adu08g02662 317 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu08g02662 317 CDD SANT 16 61 IPR001005 -
Adu08g02662 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu08g02662 317 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu08g02662 317 PANTHER TRANSCRIPTION FACTOR MYB7 1 252 - -
Adu08g02662 317 Gene3D - 68 155 - -
Adu08g02662 317 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 252 - -
Adu08g02662 317 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Adu08g02662 317 SMART sant 13 63 IPR001005 -
Adu08g02662 317 SMART sant 66 114 IPR001005 -
Adu08g02662 317 MobiDBLite consensus disorder prediction 221 238 - -
Adu08g02662 317 MobiDBLite consensus disorder prediction 221 240 - -
Adu08g02662 317 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02662 Adu-Chr8 42768340 42769668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02662 1 230 MYB Transcription Factor Family AT2G16720 60.169 1.93e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu08g02662 Myb_DNA-binding 9.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02662 K09422 - gmx:100808083 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02954 03 111545895 111547341 Adu08g02662 08 42768340 42769668 PCT