Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02652 ATGAGTGAAGAAGAATTTGATCCTTTCTCAATTATGAAACTGTTGGAGGTGCCTCTTCCGGACGCAGAGCTGTTTGCCGCAGACGTGGGACCATCTCAGTTTCAGTCGCCCTCATCCTCCAATGTGCCTCTTCCGGAGTTTCCAATTGGCAATCAACAGCCTCAGCCTCTGCCTCTGCCTCAGCCTCTGCCTCCTCTGCCTCTGCCTCTGTCTCTGCCTCAGCCTCAGCCTCTGCCTCCTCTGCCTCTGCCGGAGTTTGCAGCCAATGTGCCTCTGTGGCACTTTCCCGCCAATGTGTCTCAGCCGCAGTTTGCCGTTGACCTGTGTGGCTATCAACAACCTCAGGCACAGCCTGAGACAGTATGGAGTGGGGATGAGTACAAAGAGTTCGACATGGGAGCACCTCAGTTTCAGTGGCCCTCTGAGTTTCAGTCTCTGCCTCTGCATCATCCGGTCTGGACTGGGGACGAAAACCACAATCTTGCCGCCAATGTCGGTGGTAATCAACAGCCTCAGCCTCAGCTTCCGCTTCCATCGCAGCTTGCCACCGATGTGCCTCTGCTGCAGTTTGCCGCCAATGTCGGTGGTAACCAACCGCCTCAGTTGCAGCTTCCGCCTCTGCATGAGTTTCCCGCTGACGTGTGTGGCTATCAACAACCTCAGGCACAGCCTGAGCCCGTCTGGAGTGAGGATGAGAACAAACAGTTTGAAATAATTATTGCTGAATGTCTTCCGGAAGAAATGCAGAACCGGTGGGAGGCTGTGGCTGCTTGTCTCCCCGGGAAGACCCCCGAGCAGATACAGGAACGCTTCCAGGAGCTCCTCACCGACATCAATCTCATCCATAAATCTTATAGCAATCTGCATCACACCTCCATCGCACCTGCTGCACCTCCCACCACATTGGAACGCAATCCACTCTCCCTCCCCGGAACAATTGAACAAAACCAACCTGCCAACACCAACATAATCGAACACCAACCTTTAACTAAGACTACTGAAAGAAAGAAAACAGTTCATTGGACTCAACAAGAGAAAGAGTATGTATTATTCTATTGCTTTTTCCTCCACTTTTATTGA 1080 0.5213 MSEEEFDPFSIMKLLEVPLPDAELFAADVGPSQFQSPSSSNVPLPEFPIGNQQPQPLPLPQPLPPLPLPLSLPQPQPLPPLPLPEFAANVPLWHFPANVSQPQFAVDLCGYQQPQAQPETVWSGDEYKEFDMGAPQFQWPSEFQSLPLHHPVWTGDENHNLAANVGGNQQPQPQLPLPSQLATDVPLLQFAANVGGNQPPQLQLPPLHEFPADVCGYQQPQAQPEPVWSEDENKQFEIIIAECLPEEMQNRWEAVAACLPGKTPEQIQERFQELLTDINLIHKSYSNLHHTSIAPAAPPTTLERNPLSLPGTIEQNQPANTNIIEHQPLTKTTERKKTVHWTQQEKEYVLFYCFFLHFY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02652 359 MobiDBLite consensus disorder prediction 28 70 - -
Adu08g02652 359 SMART sant 224 277 IPR001005 -
Adu08g02652 359 Gene3D - 222 286 - -
Adu08g02652 359 Pfam Myb-like DNA-binding domain 227 275 IPR001005 -
Adu08g02652 359 ProSiteProfiles Myb-like domain profile. 228 275 IPR001005 -
Adu08g02652 359 CDD SANT 228 275 IPR001005 -
Adu08g02652 359 MobiDBLite consensus disorder prediction 49 70 - -
Adu08g02652 359 SUPERFAMILY Homeodomain-like 225 276 IPR009057 -
Adu08g02652 359 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 227 350 IPR043363 -
Adu08g02652 359 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02652 Adu-Chr8 42629080 42630159 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu08g02652 Myb_DNA-binding 7.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02652 - - ahf:112708481 630.557