Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02644 ATGAGTGAAGAAGAATTTGATCCTTTCTCAATTATGAAACTGTTGGAGGTGCCTCTTCCGGACGCAGAGCTGTTTGCCGCAGACGTGGGATCATCTCAGTTTCAGTCGCCCTCATCCTCCAATGTGCCTCTTCCTGAGTTTCCAATTGGCAATCAACAGCCTCTGCCTCTGCCTCAGCCTCTGCCTCTGCCTCTGCCTCTGTCTCTGCCTCAGCCTCAGCCTCAGCCTCAGCCTCCTCTGCCTCTGCCGGAGTTTGCAGCCAATGTGCCTCTGTGGCAGTTTCCCGCCAATTTGCCTCAGCCGCAGTTTGCCGTTGACCTGTGTGGCTATCAACAACCTCAGGCACAGCCTGAGACAGTATGGAGTGGGGATGAGAACAAAGAGTTCGACATGGGAGCACCTCAGTTTCAGTGGCCCTCTGAGTTTCAGTCTCTGCCTCTGCATCATCCGGTCTGGACTGGGGACGAAAACCACAATCTTGCCGCCAATGTGGGTGGTAATCAACAGCCTCAGCCTCAGCTTCCGCTTCCGTCGCAGCTTGCCACCGATGTGCCTCTGCTGCAGTTTGCCGCCAATGTCGGTGGTAACCAACAGCCTCAGTTGCAGCTTCCGCCTCTGCATGAGTTTCCCGCTGATGTGTGTGGCTATCAACAACCTCAGGCACAGCCTGAGACAGTATGGAGTGGGGATGAGAACAAAGAGTTCGACATGGGAGCACCTCAGTTTCAGTGGCCCTCTGAGTTTCAGTCTCTGCCTCTGCATCATCCGGTCTGGACTGGGGACGAAAACCACAATCTTGCCGCCAATGTGGGTGGTAATCAACAGCCTCAGCCTCAGCTTCCGCTTCCGTCGCAGCTTGCCACCGATGTGCCTCTGCATGAGTTTCCCGCTGACGTGTGTGGCTATCAACAACCTCAGGCACAGCCTGAGCCCGTCTGGAGTGAGGATGAGAACAAACAGTTTGAAATAATTATTGCTGAATGTCTTCCGGAAGAAATGCAGAACCGGTGGGAGGCTGTGGCTGCTTGTCTCCCCGGGAAGACCCCCGAGCAGATACAGGAACGCTTCCAGGAGCTCCTCACCGACATCAATCTCATCCATAAATCTTATAGCAATCTGCATCACACCTCCATCGCACCTGCTGCACCTCACAACACATTGGAACGCAATCCACTCTCCCTCCCCGGAACAAGTGAACAAAACCAACCTGCCAACACCAACATAATCGAACACCAACCTTTAACTAAGACTACTGAAAGAAAGAAAACAGTTCATTGGACTCAACAAGAGAAAGAagatgatgataatggttaccatcgctgtcagtaa 1329 0.5184 MSEEEFDPFSIMKLLEVPLPDAELFAADVGSSQFQSPSSSNVPLPEFPIGNQQPLPLPQPLPLPLPLSLPQPQPQPQPPLPLPEFAANVPLWQFPANLPQPQFAVDLCGYQQPQAQPETVWSGDENKEFDMGAPQFQWPSEFQSLPLHHPVWTGDENHNLAANVGGNQQPQPQLPLPSQLATDVPLLQFAANVGGNQQPQLQLPPLHEFPADVCGYQQPQAQPETVWSGDENKEFDMGAPQFQWPSEFQSLPLHHPVWTGDENHNLAANVGGNQQPQPQLPLPSQLATDVPLHEFPADVCGYQQPQAQPEPVWSEDENKQFEIIIAECLPEEMQNRWEAVAACLPGKTPEQIQERFQELLTDINLIHKSYSNLHHTSIAPAAPHNTLERNPLSLPGTSEQNQPANTNIIEHQPLTKTTERKKTVHWTQQEKEDDDNGYHRCQ 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02644 442 SUPERFAMILY Homeodomain-like 310 361 IPR009057 -
Adu08g02644 442 Gene3D - 307 371 - -
Adu08g02644 442 MobiDBLite consensus disorder prediction 414 442 - -
Adu08g02644 442 MobiDBLite consensus disorder prediction 29 80 - -
Adu08g02644 442 Pfam Myb-like DNA-binding domain 312 360 IPR001005 -
Adu08g02644 442 PANTHER SYRINGOLIDE-INDUCED PROTEIN 1-3-1B 311 431 - -
Adu08g02644 442 MobiDBLite consensus disorder prediction 383 442 - -
Adu08g02644 442 CDD SANT 313 360 IPR001005 -
Adu08g02644 442 ProSiteProfiles Myb-like domain profile. 313 360 IPR001005 -
Adu08g02644 442 SMART sant 309 362 IPR001005 -
Adu08g02644 442 MobiDBLite consensus disorder prediction 29 47 - -
Adu08g02644 442 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 311 431 IPR043363 -
Adu08g02644 442 MobiDBLite consensus disorder prediction 390 413 - -
Adu08g02644 442 MobiDBLite consensus disorder prediction 49 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02644 Adu-Chr8 42538673 42541143 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu08g02644 Myb_DNA-binding 1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02644 - - ahf:112708481 447.973