Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02619 ATGGAAGAAGGGAAAGGAAGAAGCGAGAGCGATCCAAATCGAAGAGTTAACGGTACTAGTTTCTCTATTAACGATCCGGAAAATCAAAGAGCAAAGAAATTGTGGACAGTTGATAATGTGAAGGCAATGCGGTTCAAATCGTTATCGGCTGCGAAATCATTCTACAGGTTGTATGCTGCGGCCACAGGGTTTGAGGTTGAAAAGCAAGGCAGTGTTTGGGGCGAGAACGATATGGTCGTCATGAGAAGATGGGTTTGTAATAGAGGAGGTTTTTGTAAGAAGAAGAAGAATCTAGAAAAGGCTAAGCACTCAATTCGAGCCGATTGTCCTGCTGCGTTCTGCGTTAGCTTGGGCTATGCTAGTCGCCGGTGGTTGGTAAGGGAGTTTGTGGCCGAGCATACACACGAGTTGGGATTCAAATTATGCCCCCAAATTTATCAACCTATTGAAGTAGAAGATTATTTAACAAGTCTAAAGGATGATTCAAGCACTTCCTACAGATCTTATATCACAATTGATGATGCAGAAGCTGCAATTTCTTATTTAACAGAGAAGAAGGATTCAGAGCCTCGGCTTTTCTATGAAGTAAACTATGTCAATGCTAGTTTAGCTCGGATTTTCTTTGCAGACTCTATGGCTCAGTTGGATTGTTCATGCTTTGGGGACGTGGTTGCGGTTTATAGGACTAATTCAAGTGATCTGCACTTTGTCATATTGTTTAGTCTCAACCATCATCATCAAACAACTATACTTGGATGCGCAATCCTCAGCGACGAAACTGTTGAGGCATACACATGGATGTTTCGAAAATTTCTTGATCTAATGCAGGGTTGCATGCCATTATCTATTGTGACTGATGGTAACAAAGCTTTAGGTGAAGCTATTAAGTCTGTGTTGCCAGAATCACGCCATCGCCTATGTACATGGCATCTTGAGAAAATTGCTTCTTCTATTGTTGATAATCCATCCTTTCTAGCTGATTTCAAAGTGTTGATGCTGGATTTTCTTTCGCTGAATGATTTTGAGCTGAAATGGAAGGCAATGGTTGAGAATTACAAATTATCTGAAAATCCATGGATACTGGAGATGTATAGGAAACGTCATGAGTGGGCAGAGACTTATTTGAGGGGACATTTCTGGGCCGGATTGCGAAGCACAAAAGTATGCCAAGTTCTTGATGGAAATCTGAGCAGGCTTTCACTACATAAACTAAAAATTAATCAAGTTCTCAGTCTGTATGACAGTGTTGTTATGAAAATCCGGATCAACGAGGGGAAGGCTGATTATGATTCTAAATATTCAAAATTCACTCCCTCAACCCCTCTTGTGAAAATGGAGAAACAGGCTTTTGATATATTTACAAGAGAGTCTTATCAAAGGTTTCTTTCAGAGATGCAGATGGAGATGTTTCTGGTTGCATTAGAAATAGATTATGATGATTCACCCTGCCGCAAATATATATTGGCGAAAATTGATCATGAGGACTTAGTATATGAAGTTATGTTCAATCCTTGTGGTCTAACTATTGAATGCTCATGCTTGAAGTTTGAGACATTTGGATTTCCTTGCAGTCATATCTTTCATGTATTGAAATCTGAGGGATTCAAAGACGTACCTCATAATCTCATGCACCAAAGATGGACAAAATCAGCAAAGTCAACAGCCCAATTTTGGAGGAATTACTTGCCTCCGGTGTCTGTTGATGTTGTTGCCGGAGTGATGAGTTATGGTAGGGTGGTGTGTTCCTCTTCCCCAATGCTTTACTTGGGAACACAGTCAGAGGAGGCCTTTAAGATTGTGTCCAGCTGCTTTGTGAAGCTGAAGGGTGAATTGGATAGACAGGACAATAGTGTTCTTGATGTGCAAGATAACAAGGATACTTCTTCATCATCAGATTGGAAAATTGAACAAAGTGGATTATGGGATTACATTAACTATCCATACTTTGAGTATGTACGAGTAATCGATATGATTTTTTTCTTGTTTTCTTTTCTTTTTCTGTCACATATTTCTGACTTGTAG 2022 0.3986 MEEGKGRSESDPNRRVNGTSFSINDPENQRAKKLWTVDNVKAMRFKSLSAAKSFYRLYAAATGFEVEKQGSVWGENDMVVMRRWVCNRGGFCKKKKNLEKAKHSIRADCPAAFCVSLGYASRRWLVREFVAEHTHELGFKLCPQIYQPIEVEDYLTSLKDDSSTSYRSYITIDDAEAAISYLTEKKDSEPRLFYEVNYVNASLARIFFADSMAQLDCSCFGDVVAVYRTNSSDLHFVILFSLNHHHQTTILGCAILSDETVEAYTWMFRKFLDLMQGCMPLSIVTDGNKALGEAIKSVLPESRHRLCTWHLEKIASSIVDNPSFLADFKVLMLDFLSLNDFELKWKAMVENYKLSENPWILEMYRKRHEWAETYLRGHFWAGLRSTKVCQVLDGNLSRLSLHKLKINQVLSLYDSVVMKIRINEGKADYDSKYSKFTPSTPLVKMEKQAFDIFTRESYQRFLSEMQMEMFLVALEIDYDDSPCRKYILAKIDHEDLVYEVMFNPCGLTIECSCLKFETFGFPCSHIFHVLKSEGFKDVPHNLMHQRWTKSAKSTAQFWRNYLPPVSVDVVAGVMSYGRVVCSSSPMLYLGTQSEEAFKIVSSCFVKLKGELDRQDNSVLDVQDNKDTSSSSDWKIEQSGLWDYINYPYFEYVRVIDMIFFLFSFLFLSHISDL 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02619 673 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 556 IPR031052 GO:0006355
Adu08g02619 673 MobiDBLite consensus disorder prediction 1 25 - -
Adu08g02619 673 ProSiteProfiles Zinc finger SWIM-type profile. 498 534 IPR007527 GO:0008270
Adu08g02619 673 SMART 26again6 509 536 IPR006564 GO:0008270
Adu08g02619 673 PANTHER PROTEIN FAR-RED IMPAIRED RESPONSE 1 33 556 - -
Adu08g02619 673 Pfam FAR1 DNA-binding domain 53 137 IPR004330 -
Adu08g02619 673 Pfam MULE transposase domain 226 313 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02619 Adu-Chr8 42282320 42284341 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu08g02619 MULE 2e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02619 - - adu:107463166 1354.73