Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02609 ATGCAAGGTGGATTAGAGTTACCGCCAGGGTTCAGGTTTCACCCGAGCGACGAGGAATTGGTGAACCACTATCTCTGCAAGAAATGCGCAAAGCAATCAATTGCTGCTCCAATAATTAAAGAAATCGATTTGTACAAGTTCGATCCGTGGCAGCTTCCAGAGATGGCGTTGTACGGAGAGAAGGAGTGGTACTTTTTTTCGCCGAGGGATAGGAAATATCCGAACGGATCCCGGCCGAACCGGGCGGCTGGGAGCGGGTACTGGAAGGCGACCGGGGCGGATAAGCCGATAGGGAAGCCGAAGGCGTTAGGGATAAAGAAAGCGCTAGTGTTCTACGCCGGAAAGGCCCCGAAAGGAGTGAAGACTAATTGGATTATGCATGAGTACCGTCTCGCCAATGTTGACAGATCCGCCGCCAACAAACTCAACAACAACAACTTGAGGCTTGATGATTGGGTGTTGTGTCGAATCTACAACAAGAAAGGGAAGATTGAGAAATTCAACTCTGCCACAACAGGGTTGGAACAGAAACTACCAAAGTTTTCCCCAGGAGAGATACTTCACTATGATCATGAGCATGAGCATGAGACCAAGCCAAAGATTATCCACAATTTCTCCAACAATGAGCACCAATTGTACATGGACACATCAGATTCCGTTCCAAGGCTGCACACGGACTCTAGCTGCTCGGATCACGCGGTTTCGCCGGACGCCACCTGCGACAAGGAGGTGGAGAGCAACCCAAAGTGGAGCAATGAGCTAGATATGCAGCTGTTTGATACCTTTGATTTTCAGCTCAACAACTATGATAATAACCTCCCAATGAATGATGATGACCTTTTTGGAAATCAGTTCCAAATGAATCAGCTCATGTCTTTCCAAGACACATTCTTGTTCCCACAAAAGCCATTTTGA 915 0.4776 MQGGLELPPGFRFHPSDEELVNHYLCKKCAKQSIAAPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAANKLNNNNLRLDDWVLCRIYNKKGKIEKFNSATTGLEQKLPKFSPGEILHYDHEHEHETKPKIIHNFSNNEHQLYMDTSDSVPRLHTDSSCSDHAVSPDATCDKEVESNPKWSNELDMQLFDTFDFQLNNYDNNLPMNDDDLFGNQFQMNQLMSFQDTFLFPQKPF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02609 304 ProSiteProfiles NAC domain profile. 7 160 IPR003441 GO:0003677|GO:0006355
Adu08g02609 304 Gene3D NAC domain 16 165 IPR036093 GO:0003677|GO:0006355
Adu08g02609 304 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Adu08g02609 304 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 281 - -
Adu08g02609 304 PANTHER NAC TRANSCRIPTION FACTOR 56 5 281 - -
Adu08g02609 304 MobiDBLite consensus disorder prediction 224 246 - -
Adu08g02609 304 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02609 Adu-Chr8 42201308 42202693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02609 5 304 NAC Transcription Factor Family AT1G01720 59.740 2.40e-121 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu08g02609 NAM 9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02609 - - adu:107463232 636.721