Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02603 ATGATGAATCCATGGAATATCAGAGACCCGTACGATATGATAGACTTTGATGCCGACGATGAAGCACCGCAGTTTCAGTTTGAGTTTCCGCCTCTGCCTGAGCCCGTCTGGAATGCGGACGAAAACAATGTAGGTGAGCCGTGTGCCATGGACGTGAGTGGTAATCAACCACCACAGCCGGTTATTGATTCATGTTTCCCGGAAGCTATGAAGAGGACAGAGCACTATTGGGGAAGCCCATTATCACTTCAGTCTCAGCCTCAGCCATGTGCCATGGACGTGAGTGGTAATGAACCACCTCAGCCAGTTATTGATGATTGTTTCCCGGAAGTTATAAAGAGGACAGAGCACTATTGGGGAAGCCCATTATCTGGTTCTCAATCACTTCAGTCTCCGTCTCAGTCTCAGTCACGTGCCATTGACGTGTGTGGTAATCAACCACTTCAGTCTCAATCTCAGACGGATATAGTAAGGACGCTGACGGATGAGTTTTTCGCTGACACCTGTGGTTATCCACCACCTCAGCCTCAGCCTCAGACTCAGTGGGATACCAGTAGGAACATGTTAAAGCTGATTCCCGATGTCGGTGGTCATCAACCACTTCAACCTCAAGCTCCGGTCTGGACTTGGGAGGAGAATAAAGCATTTGAGTCAATTATTACCAGTTGTTTTCAGGATGATATCCAGAACCGCTGGGAGGACGTGGCTGCTCGTCTCCCCGGCAGGACCCCGACACAGCTGCAAGAACGCTTTCAGAAGCTGATGAACGACATCAATACAATGACCATCATGATGGAACACAACCCTCTCTCCATCCCTATCAATGCAACAACACCACCACCACCATCACACCCTTATTCCACTCATCATCATCACAGGGAGGAGGTCGTGCCAGCTGCAGAGGAGGAGGTAGTGCCAACTGCACAAGAGGAGGCAGCACCAACAAAGACAGGATATCATTGGACCGAAGATGAACATAGAGAAAACCCAGTATCAGGAATTCAATCATGGGTTTGGAATCTGAGTGAACCTGACCCAGCACTGAGAATAGTTTGTCCTCAGATCTCACCTATTATACCCCATAATTACAAGGAGAGTAGCTTTCCTGCACCAGTTTTTACTTTCGTGTTAAATAATTTTGGAAAAACAACAGCAGATGTCACCTTGCTTTTCACATGGATTGTAAGTGAAACTTTTTTGTTGACTATTTACTATTACACTGTTGGTGTTTTAATGTTTTATCCTATTCTTGGTCCTTGGGGTGCTTAA 1269 0.4673 MMNPWNIRDPYDMIDFDADDEAPQFQFEFPPLPEPVWNADENNVGEPCAMDVSGNQPPQPVIDSCFPEAMKRTEHYWGSPLSLQSQPQPCAMDVSGNEPPQPVIDDCFPEVIKRTEHYWGSPLSGSQSLQSPSQSQSRAIDVCGNQPLQSQSQTDIVRTLTDEFFADTCGYPPPQPQPQTQWDTSRNMLKLIPDVGGHQPLQPQAPVWTWEENKAFESIITSCFQDDIQNRWEDVAARLPGRTPTQLQERFQKLMNDINTMTIMMEHNPLSIPINATTPPPPSHPYSTHHHHREEVVPAAEEEVVPTAQEEAAPTKTGYHWTEDEHRENPVSGIQSWVWNLSEPDPALRIVCPQISPIIPHNYKESSFPAPVFTFVLNNFGKTTADVTLLFTWIVSETFLLTIYYYTVGVLMFYPILGPWGA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02603 422 CDD SANT 208 255 IPR001005 -
Adu08g02603 422 SMART sant 204 257 IPR001005 -
Adu08g02603 422 MobiDBLite consensus disorder prediction 119 139 - -
Adu08g02603 422 ProSiteProfiles Myb-like domain profile. 208 255 IPR001005 -
Adu08g02603 422 Pfam beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 340 393 IPR024462 -
Adu08g02603 422 PANTHER NON-LYSOSOMAL GLUCOSYLCERAMIDASE 334 396 - -
Adu08g02603 422 MobiDBLite consensus disorder prediction 120 139 - -
Adu08g02603 422 SUPERFAMILY Homeodomain-like 207 258 IPR009057 -
Adu08g02603 422 Pfam Myb-like DNA-binding domain 208 254 IPR001005 -
Adu08g02603 422 Gene3D - 204 264 - -
Adu08g02603 422 PANTHER BILE ACID BETA-GLUCOSIDASE-RELATED 334 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02603 Adu-Chr8 42130326 42135456 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu08g02603 Glyco_hydr_116N 7.5e-16 CL0103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02603 K17108 - adu:107463192 606.675