Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02594 ATGAGTCAAGAGAATTCAGATGTGTTGAGGATGATAGAGGCAGAGCTTTTTGTCGACGACGACAATGTGGGTGGTAATCCGCCGCCTCAGCCCCAGCCTGATTGGGATATGGAGAAGATGTTAGAGCTGATTGCCGGCGACGTGGGTGGTCATCAACCACTTCAACCTCAACCTCAGTCCAACCTGCACTCAGATAAATGGAATATGACAGAGCAGTTGGATAATCAACCACCTCGTTCTTGGAACGACAACAAGGAGAACACGAAGAAGAGAAGAAGAAGAAGAAGAAGGAGTGAAGAGCAATCAGATTCTGCAATGATGAATCCATGGGATATCAGAGACCCGTACGATATGATAGACTTTGATGCCGACGATGAAGCACCGCAGTTTCAGTTTGAGTGTCCGCCTCTGCCTAAGCCCGTCTGGAATGGGGACGAAAACAATGTAGGTGAGCCGTGTGCCATGGACGTGAGTGGTAATGAACCACCTCAGCCAGTTATTGATGAGTGTTTCCCGGAAGTTATGAAGAGGACAGAGCAGTATTGGGGAAGCCCATTATCTGGTTCTCAACCACTTCAGTCTCAGTCTCAGTCACGTGCCATTGACGTGTGTAGTAATCAACCACTTCAGTCTCAATCTCAGACGGATATAGTAAGGACGCTGACGGATGAGTTTTTCGCTGACACCTGTGGTTATCCACCACCTCAGCCTCAGACTCAGTGGGATACCAGTAGGAACATGTTAGAGCTGATTCCAGATGTCGGTGGTCATCAACCACTTCAACCTCAACCTCCGGTCTGGACTTGGGAGGAGAATAAAGCATTTGAGTCAATTATTACCAGTTGTTTTCAGGATGATATCCAGAACCGCTGGGAGGACGTGGCTGCTCGTCTCCCCGGCAGGACCCCGACACAGCTGCAAGAACGCTTTCAGAAGCTGATGAACGACATCAATACAATGACCATCATGATGGAACACAACCCTCTCTCCATCCCTATCAATGCAACAACACCACCACCACCATCACACCCTTATTCGACTCATCATCATCACAGGGAGGAGCTCGTGCCAGCTGCAGAGGAGGAGGTAGTGCCAACTGAACAAGAGGAGGCAACACCAACAAAGACAGGATATCATTGGACCGAAGATGAACATAGTTCTTTGGCCTTGATGGCAATGCCAAAAGGGTCGGTGAACTAG 1200 0.4892 MSQENSDVLRMIEAELFVDDDNVGGNPPPQPQPDWDMEKMLELIAGDVGGHQPLQPQPQSNLHSDKWNMTEQLDNQPPRSWNDNKENTKKRRRRRRRSEEQSDSAMMNPWDIRDPYDMIDFDADDEAPQFQFECPPLPKPVWNGDENNVGEPCAMDVSGNEPPQPVIDECFPEVMKRTEQYWGSPLSGSQPLQSQSQSRAIDVCSNQPLQSQSQTDIVRTLTDEFFADTCGYPPPQPQTQWDTSRNMLELIPDVGGHQPLQPQPPVWTWEENKAFESIITSCFQDDIQNRWEDVAARLPGRTPTQLQERFQKLMNDINTMTIMMEHNPLSIPINATTPPPPSHPYSTHHHHREELVPAAEEEVVPTEQEEATPTKTGYHWTEDEHSSLALMAMPKGSVN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02594 399 MobiDBLite consensus disorder prediction 53 82 - -
Adu08g02594 399 ProSiteProfiles Myb-like domain profile. 267 314 IPR001005 -
Adu08g02594 399 SMART sant 263 316 IPR001005 -
Adu08g02594 399 MobiDBLite consensus disorder prediction 16 114 - -
Adu08g02594 399 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 265 387 IPR043363 -
Adu08g02594 399 SUPERFAMILY Homeodomain-like 266 317 IPR009057 -
Adu08g02594 399 Gene3D - 263 323 - -
Adu08g02594 399 CDD SANT 267 314 IPR001005 -
Adu08g02594 399 Pfam Myb-like DNA-binding domain 266 313 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02594 Adu-Chr8 42039958 42042663 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu08g02594 Myb_DNA-binding 9.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02594 - - adu:107463192 492.656