Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02593 ATGATGAATCCGTGGGATATCAGAGACCCGTGGGATATGATAGACTTTGATGCCGATGAAGCACGGCAGTTTCAGTTTGAGTTTCCGCCTCTGCCTGAGCCCGTCTGGAATGGGGACGAAAAAAAGATTGTTGCCGCCAATGTAGGTGATCCCCAGCCCCAGCCGTGTGCCATGGACGTGAGTGGTAATGAACCACCTCAGCTGGTTATTGATGAGTGTTTGGCCGAAGCAATGAACATGACAGAGCAGTATTGGGAAAGCCCATTATCTGGTTATCAACCACTTCAGTGTCAGCCTCAGTCATGTGCCATTGACGTGTGTGGTAATCAACCACCTCAGCTACCGTCTCCGTCTCAGTCTCAGCCTTGGTCTCGGGCACTTCAGTTTCAGCCTCAGCCATGTGCCATTGACGTGTGTGGTAATCAACCACCTGAACTACCGTCTCAGCCCCAGCCCCAGCCTTGGTCTAGGCCACTTCAGTCTCAGCCTCAACCGTGTGCCATTGACGTGTCTGGAAATCAACCTACTCAGCTACCGTCTCAGCCTCAGCCGTGTGCCATTGGCATGTGTGGTAATCTACCACCTCAGCTACCGCCTCAGCCTCAGCCTCAGCCTCAGCCTCAGCTTCAGCCTCGGCCTCAGCCTCAGTCTCGGCCTTGGTCTCGGTCTCGGCCTCGGCTTCTTTCTCACCCTCGGCCTCAGTCTCAGAGGGATATAGTAAGGACGGTGACGGATGAGTTTTTCGCTGACACGTGTGGTTATCCACCACCTCAGCCTCAGCCTCAGACTCAGTGGGATTCGAGGAACATGTTAGAGCTGATTCCTGATGTCGGTGGTCATCAACCACTTCAACCTCAACCTCCGGTCTGGACTTGGGAGGAGAACAAAGCCTTTGAGTCGGTTATTACCAGTTGTTTTCAGGATGCTATCGACAACCGTTGGGAGGACGTTGCTGCTCGTCTCCCCGGCAGGACCCCGGCACAGCTGCAAGAGCACTTTCAGAAGCTGATGAACGACATCAAAGCCATCCATAACGGTCATCATACAAGCACTCCTCTCTCCATCCCCATCATCAATGCAACAACACCACCACCATCACAGCCTTATTCGACGGATCATCATCACAGGGTGGAGGTCGTGCCAGCTGCAGAGGAGGAGGTCGTGCCAACTGCACAAGAGGAGGCAGCACCAACAAACACAGGATATCATTGGACCGAAGATGAACATAGGTTATTTATTAAAGGGTACCAAGAAGAAGAAATTGTGCCCTATTCCGAGGTTTTTAATGGATGGAGGAGGATTTGCTTAAAGGAGGAAGAACATTTCTCCGGCCTTGATGGCAATGCCGAAGGGGACGGCGAACTAGATTTTATCTAA 1377 0.5229 MMNPWDIRDPWDMIDFDADEARQFQFEFPPLPEPVWNGDEKKIVAANVGDPQPQPCAMDVSGNEPPQLVIDECLAEAMNMTEQYWESPLSGYQPLQCQPQSCAIDVCGNQPPQLPSPSQSQPWSRALQFQPQPCAIDVCGNQPPELPSQPQPQPWSRPLQSQPQPCAIDVSGNQPTQLPSQPQPCAIGMCGNLPPQLPPQPQPQPQPQLQPRPQPQSRPWSRSRPRLLSHPRPQSQRDIVRTVTDEFFADTCGYPPPQPQPQTQWDSRNMLELIPDVGGHQPLQPQPPVWTWEENKAFESVITSCFQDAIDNRWEDVAARLPGRTPAQLQEHFQKLMNDIKAIHNGHHTSTPLSIPIINATTPPPSQPYSTDHHHRVEVVPAAEEEVVPTAQEEAAPTNTGYHWTEDEHRLFIKGYQEEEIVPYSEVFNGWRRICLKEEEHFSGLDGNAEGDGELDFI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02593 458 MobiDBLite consensus disorder prediction 145 159 - -
Adu08g02593 458 MobiDBLite consensus disorder prediction 136 237 - -
Adu08g02593 458 Gene3D - 286 349 - -
Adu08g02593 458 ProSiteProfiles Myb-like domain profile. 290 337 IPR001005 -
Adu08g02593 458 CDD SANT 290 337 IPR001005 -
Adu08g02593 458 MobiDBLite consensus disorder prediction 194 214 - -
Adu08g02593 458 SUPERFAMILY Homeodomain-like 289 345 IPR009057 -
Adu08g02593 458 SMART sant 286 339 IPR001005 -
Adu08g02593 458 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 311 341 IPR017930 -
Adu08g02593 458 Pfam Myb-like DNA-binding domain 289 336 IPR001005 -
Adu08g02593 458 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 288 417 IPR043363 -
Adu08g02593 458 MobiDBLite consensus disorder prediction 160 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02593 Adu-Chr8 42021437 42024042 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu08g02593 Myb_DNA-binding 8.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02593 - - ahf:112707954 721.465