Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02549 ATGACCTTAGTGTCACAAGGTGGAAAATTTGAACTTGGTTTCTTCAGCCCTGGTAATTCGCACAAGCGTTACTTGGGAATTTGGTACAAGAAAATTCCAGTTCACACAGTTGTTTGGGTTGCTAATAGGGCCAACCCCATCAATGATTTCTCAGGAACTTTAACAGTGAAGAGCACGGGCAATCTTTCACTCACAGAAAATGGTACTGAAACTACTTTTTGGAGCACAATCTCTCGAAAACAAGCAAAGAATCCGGTATTGGAGCTCTTGGACAGTGGCAATCTTGTGTTAAGAAATGAAGGGGAATCAAATCCAAAGGCCTATTTGTGGCAAAGCTTTGATTATCCTTCAGATACATACTTGCCATCGATGAAGTTAGGAAGGGACCTCCAAAACGGTTTTGATTGGTGCGTAACTTCTTGGAAGAGTCGAAATGATCCATCCCCTGTAGGCTTTTCTCTTGGTTTAGTTCTCAATGATTATCCCGAGTTTTCCATTATGAATGGCACAAAAAACTTATATCGGGCTGGACCTTGGAATGGCCTTTACTTAAGTGGCTACCCGGATCTATCCTATACATATATCTTTGAAACCACTTATGTCAAAAACAAGGATGAGATATCCTACAGCTCTAACACCAAGATTGATTCTATCCTTGCAAGAGCTGTAATAAACCAAACAAGTCAATCTATTACACAGTATATATGGGATGACAATCTTCAGAATTGGAAAAGTTTTGGATCAAAGCCAGTTGATGTGTGTGATAAATATGACCTTTGTGGAGCCTTTAGTTATTGCAGTGTAACAGAACCACAGCATGTCTGCCAATGCTTCAAAGGGTTCAGTCCAAAGTCACCAGAAGCATGGAACTCAAACAACTCCTCACAAGGATGCATTCGCGACAAACCATTAAGCTGCAATAATGTCACAAGCACTGATGGTTTTGTCAAATACACAGGCTTGAAAGTCCCGGATACTCAGCATACTAAGCTGCATGAGAATATTAATTTAGATGAATGCAGAAATATGTGTTTGAAGAACTGCTCTTGCATGGCTTATGCCAATTCAGACATAAGAGGAGGAGGCAGTGGCTGCGTCATGTGGTTTGGTGATCTAATTGACATCAAAATGTTTCAATCTGGTGGACAGGATCTGTACATCCGAATGCCTGCTTTGGAATCAGGACTTCAACATCGGAACAAGAAAAAAGTGATAATTACTAGCATCATTGGTGCAATTTGTGCAACAGTTCTACTTTGTGTTTATGTTATATACAGAGTCCAAAGGAACAATATTGAATGGTCAAAAGCAGAATTGTTTGAAGGATATGTAAATGACACGGATCTACCCATGTTTGATCTACTAATGGTTACTACTGCCACTGACAACTTCTCCTTGAATAACAAGATTGGACAAGGTGGTTTTGGAACTGTATATAAGGGGAAATTAGCAGATGGGCAAGAAATTGCTGTCAAGAGACTTTCACACAGTTCTGGCCAAGGAATGACGGAATTTCTAACTGAAGTAAAACTTATTGCAAAGCTTCAGCATCGAAATTTAGTAAAACTTCTTGGTTGCTGCACTGGAGGACAAGAAAAGTTGTTAGTTTATGAATACATGGTTAATGGCAGCCTAGACAACTTCATTTTTGATAGAATGAAAAGCAAGTTGCTGGAGTGGCCTCAACGCTTCCTCATAATATttggagttgctaggggacttctatatttacatcatgattcaagattgagaattatccacagagatctcaaattaagtaacgttttacttgatgataagctaaatcctaaaatatcagattttggaattgctagagcttTTGGAGTTGATCAGACTCATGGAAACACAAATAGAGTTATTGGGACTTAG 1890 0.3677 MTLVSQGGKFELGFFSPGNSHKRYLGIWYKKIPVHTVVWVANRANPINDFSGTLTVKSTGNLSLTENGTETTFWSTISRKQAKNPVLELLDSGNLVLRNEGESNPKAYLWQSFDYPSDTYLPSMKLGRDLQNGFDWCVTSWKSRNDPSPVGFSLGLVLNDYPEFSIMNGTKNLYRAGPWNGLYLSGYPDLSYTYIFETTYVKNKDEISYSSNTKIDSILARAVINQTSQSITQYIWDDNLQNWKSFGSKPVDVCDKYDLCGAFSYCSVTEPQHVCQCFKGFSPKSPEAWNSNNSSQGCIRDKPLSCNNVTSTDGFVKYTGLKVPDTQHTKLHENINLDECRNMCLKNCSCMAYANSDIRGGGSGCVMWFGDLIDIKMFQSGGQDLYIRMPALESGLQHRNKKKVIITSIIGAICATVLLCVYVIYRVQRNNIEWSKAELFEGYVNDTDLPMFDLLMVTTATDNFSLNNKIGQGGFGTVYKGKLADGQEIAVKRLSHSSGQGMTEFLTEVKLIAKLQHRNLVKLLGCCTGGQEKLLVYEYMVNGSLDNFIFDRMKSKLLEWPQRFLIIFGVARGLLYLHHDSRLRIIHRDLKLSNVLLDDKLNPKISDFGIARAFGVDQTHGNTNRVIGT 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02549 629 SMART ntp_6 310 389 IPR003609 -
Adu08g02549 629 Gene3D Phosphorylase Kinase; domain 1 426 539 - -
Adu08g02549 629 PANTHER - 2 629 - -
Adu08g02549 629 ProSiteProfiles EGF-like domain profile. 250 287 IPR000742 -
Adu08g02549 629 Gene3D Hepatocyte Growth Factor 307 387 - -
Adu08g02549 629 Gene3D - 1 113 IPR036426 -
Adu08g02549 629 CDD B_lectin 2 116 IPR001480 -
Adu08g02549 629 ProSiteProfiles PAN/Apple domain profile. 306 390 IPR003609 -
Adu08g02549 629 Pfam Protein tyrosine and serine/threonine kinase 465 618 IPR001245 GO:0004672|GO:0006468
Adu08g02549 629 CDD PAN_AP_plant 303 390 - -
Adu08g02549 629 Pfam D-mannose binding lectin 36 142 IPR001480 -
Adu08g02549 629 ProSiteProfiles Protein kinase domain profile. 464 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02549 629 SUPERFAMILY alpha-D-mannose-specific plant lectins 37 147 IPR036426 -
Adu08g02549 629 ProSiteProfiles Bulb-type lectin domain profile. 1 110 IPR001480 -
Adu08g02549 629 Pfam PAN-like domain 309 375 IPR003609 -
Adu08g02549 629 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 629 - -
Adu08g02549 629 SMART serkin_6 464 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g02549 629 SUPERFAMILY Protein kinase-like (PK-like) 445 629 IPR011009 -
Adu08g02549 629 SMART blect_4 2 116 IPR001480 -
Adu08g02549 629 Gene3D Transferase(Phosphotransferase) domain 1 540 629 - -
Adu08g02549 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Adu08g02549 629 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
Adu08g02549 629 Pfam S-locus glycoprotein domain 174 285 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02549 Adu-Chr8 41534696 41539526 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02549 393 629 Receptor kinase-like Gene Family AT4G04500 54.008 3.33e-75 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu08g02549 PK_Tyr_Ser-Thr 5.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02549 - - aip:110265385 991.49