Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02547 ATGGCTTCATCAAATGAGATCTTTGAAGGTCAAGTTCAGTTGTACAAACACATGTTTGCATTCTTAGACTCTCTTTGCCTTAAGTGGTGTGTGGATCTAAGCATACCAAACATAATCCACAACCATGGTCAACCTATGACTCTTCATGAGTTGGTTTCCAAGTTACAAGTTCCATTAACTAAGGTTAGTGGTGTGCACCGTTTAATGCGTTATCTTGCACACATTGGATTCTTTGACATAGTAAGAATTACCCAAGAAGAAAAGGAAGCATATGCTCTTACTTATGTATCAAAGCTCCTTGTTAGAGGTAGTGATCATTGTTTAGCTCCAATGGTTGACCTTATTCTTGACCCAACTATCTCAACTTCATATCAACAACTTGGGAAATGGATTCATGATGAGGGGAATCAAACACCATTTGCCATGGCATTGGGTACAGGTATTTGGGACTTCCTCAACAAAAACCCTACACATATGAAATACTTCAATGATGCAACTGCTAGTGACTCTCAAATCATAAACTTGGCATTGAGAGATCATGGTGTTGTCTTTGAAGGGTTGGAATCAATTGTAGATGTTGCTGGAGGAACTGGAATGGTAGCCAAGTATATCTCTGAAACTTTTCCACATTTGAAATCCATAGTTTTTGATCTTCCACAGGTTGTGAAAAATCTTAAAGGAACCAACAATTTGACTTATGTTGGTGGGGACATGTTCCAATCTATCCCTAAAGCTGATGCAGTTTTACTTAAGTGGATTTTACATGATTGGGATGATGATAATTGCATAAAGATATTGAAAAAATGCAAAGATGCTGTTTCTTCAAGTAATAATAAAAGAGGAAAAATAATTATCATAGATATTGTGATAGATGATGAGAAAAAAGATGAGCCTACTGAAATTACCCAAGCAAAGCTTCAATTGGATTTAGTGGTGACAGCATATTATAATGGAAAAGAAAGAACCAAAGAAGAATGGAAGAAACTCTTCATGGAAGCAGATTGTCATCAAGACTACAAAATTTCACCTTTAACCGGACATATGTCTCTTATTGAGATATATATTTAA 1068 0.3596 MASSNEIFEGQVQLYKHMFAFLDSLCLKWCVDLSIPNIIHNHGQPMTLHELVSKLQVPLTKVSGVHRLMRYLAHIGFFDIVRITQEEKEAYALTYVSKLLVRGSDHCLAPMVDLILDPTISTSYQQLGKWIHDEGNQTPFAMALGTGIWDFLNKNPTHMKYFNDATASDSQIINLALRDHGVVFEGLESIVDVAGGTGMVAKYISETFPHLKSIVFDLPQVVKNLKGTNNLTYVGGDMFQSIPKADAVLLKWILHDWDDDNCIKILKKCKDAVSSSNNKRGKIIIIDIVIDDEKKDEPTEITQAKLQLDLVVTAYYNGKERTKEEWKKLFMEADCHQDYKISPLTGHMSLIEIYI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02547 355 Pfam Dimerisation domain 26 73 IPR012967 GO:0046983
Adu08g02547 355 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 4 354 - -
Adu08g02547 355 PANTHER O-METHYLTRANSFERASE 4 354 IPR016461 GO:0008168
Adu08g02547 355 Gene3D Vaccinia Virus protein VP39 102 354 IPR029063 -
Adu08g02547 355 Gene3D - 1 100 IPR036388 -
Adu08g02547 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 105 352 IPR029063 -
Adu08g02547 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Adu08g02547 355 Pfam O-methyltransferase domain 124 333 IPR001077 GO:0008171
Adu08g02547 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 355 IPR016461 GO:0008168
Adu08g02547 355 SUPERFAMILY "Winged helix" DNA-binding domain 4 104 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02547 Adu-Chr8 41508226 41510515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02547 25 329 Monolignol Biosynthesis Gene Families AT5G54160 31.310 2.06e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02547 K22588 - ag:AAC49926 429.098